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A spatially unbiased atlas template of the human cerebellum. (2006)

by J Diedrichsen
Venue:Neuroimage
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by Jessica A. Bernard, Rachael D. Seidler, Kelsey M. Hassevoort, Bryan L. Benson, Robert C. Welsh, Jillian Lee Wiggins, Susanne M. Jaeggi, Martin Buschkuehl, Christopher S. Monk, John Jonides, Scott J. Peltier, Daniel S. Margulies, Max Planck, Jessica A. Bernard, Department Of , 2012
"... doi: 10.3389/fnana.2012.00031 Resting state cortico-cerebellar functional connectivity networks: a comparison of anatomical and self-organizing map approaches ..."
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doi: 10.3389/fnana.2012.00031 Resting state cortico-cerebellar functional connectivity networks: a comparison of anatomical and self-organizing map approaches
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...e of the potential for distortions when normalizing the cerebellum to standard space (Diedrichsen et al., 2009), the cerebellum was normalized separately to a spatially unbiased atlas template (SUIT; =-=Diedrichsen, 2006-=-; Diedrichsen et al., 2009) also using ANTS. Similarly, the warp vectors were then applied to the functional images resulting in normalized whole-brain structural and functional images, and separate n...

Cortical reorganisation

by unknown authors
"... pr fo uli 419 ..."
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...ght side. In a whole brain analysis on the object task, we found a significant interaction effect in the right dorsal premotor cortex (45, 8, 37) and left cerebellum, namely lobule VI (−33, −61, −29, =-=Diedrichsen, 2006-=-). The BOLD signal changes extracted from the significant clusters are depicted in Fig. 2. Post-hoc t-tests revealed a significant difference between the right premotor BOLD activity during restraint ...

Functional MRI

by Et V , 2014
"... la ..."
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... subject data to a common cerebral space leads to suboptimal alignment of cerebellar data, we utilized the spatially unbiased infratentorial template (SUIT) toolbox, version 2.5.2 (Diedrichsen, 2009; =-=Diedrichsen, 2006-=-) running on SPM8 (Friston, et al., 2007), to bring functional statistics maps of each subject into a common cerebellar space. Then, cerebellar group analysis consisted of voxel-wise, one-sample t-tes...

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by Kristen Lindquist, Tor D. Wager A , 2008
"... Functional grouping and cortical–subcortical interactions in emotion: A meta-analysis of neuroimaging studies ..."
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Functional grouping and cortical–subcortical interactions in emotion: A meta-analysis of neuroimaging studies
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...he inclusion of the superior cerebellum in this functional group is an artifact due to inconsistent spatial normalization across studies, as warping procedures typically behave poorly in this region (=-=Diedrichsen, 2006-=-). Thus, the connectivity with occipital regions may be driven by peaks that actually lie within the inferior temporal–occipital cortex. Nevertheless, this does not preclude the notion that the superi...

NeuroImage 67 (2013) 354–362 Contents lists available at SciVerse ScienceDirect

by unknown authors
"... journal homepage: www.elsevier.com/locate/ynimg ..."
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...oimage.2012.11.041W. van der Zwaag et al. / NeuroImage 67 (2013) 354–362 355 Fig. 1. Anatomy of the cerebellum. A: a sagittal slice from the SUIT toolbox with the individual lobules shown in colour (=-=Diedrichsen, 2006-=-). The insert shows the position of the sagittal slice with a white line on a coronal slice. B: an equivalent slice of an anatomical from an example subject with the activation mask overlaid (f-test o...

NeuroImage 64 (2013) 616–629 Contents lists available at SciVerse ScienceDirect

by John A. Bogovic A, Bruno Jedynak B, Rachel Rigg E, Annie Du F, Bennett A. L, Man D
"... journal homepage: www.elsevier.com/locate/ynimg Approaching expert results using a hierarchical cerebellum parcellation protocol for ..."
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journal homepage: www.elsevier.com/locate/ynimg Approaching expert results using a hierarchical cerebellum parcellation protocol for

Thèse dirigée par Chantal Delon-Martin

by Docteur De, L’université De Grenoble, Fabrizio Pizzagalli, Jean-françois Mangin, Phd Cea Neurospin, François Moutet, Prof Hopital, Albert Michallon, Chu Grenoble, Michel Dojat , 2013
"... obtenir le grade de ..."
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obtenir le grade de

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by Gabriëlla Blokl, Katie Mcmahon, Paul Thompson, Nick Martin, Greig De Zubicaray, Margie Wright
"... Sources of variation in cerebellar activation during cognition: ..."
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Sources of variation in cerebellar activation during cognition:
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...essing � Using SPM5, fMRI data were realigned, smoothed with an 8 mm FWHM Gaussian kernel, detrended, coregistered with the twin’s 3D T1-weighted scan, and spatially normalised using the SUIT Toolbox =-=[1]-=-. � t-scores were extracted from 2>0-back contrast images generated at the single-subject level in each of 11,800 voxels comprising a cerebellar activation mask created from a group random effects ana...

NeuroImage xxx (2009) xxx–xxx Contents lists available at ScienceDirect

by unknown authors
"... journal homepage: www.elsevier.com/locate/ynimg Evolution of the cerebellar cortex: The selective expansion of prefrontal-projecting ..."
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journal homepage: www.elsevier.com/locate/ynimg Evolution of the cerebellar cortex: The selective expansion of prefrontal-projecting
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...left is –x, posterior is –y, inferior is –z) using a rigid body transformation performed in FLIRT (Jenkinson et al., 2002). The image origin was then set to the anterior commissure. The SUIT toolbox (=-=Diedrichsen, 2006-=-; Diedrichsen et al., 2009) was then used to automatically isolate the cerebellum and brainstem from the surrounding tissue. Image outputs from SUIT were manually edited using FSLView to remove the br...

Multicontrast Connectometry: A New Tool to Assess Cerebellum Alterations in Early Relapsing-Remitting Multiple Sclerosis

by David Romascano, Djalel-eddine Meskaldji, Guillaume Bonnier, Gunnar Krueger, Cristina Granziera
"... r r Abstract: Background: Cerebellar pathology occurs in late multiple sclerosis (MS) but little is known about cerebellar changes during early disease stages. In this study, we propose a new multicontrast “connectometry ” approach to assess the structural and functional integrity of cerebellar netw ..."
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r r Abstract: Background: Cerebellar pathology occurs in late multiple sclerosis (MS) but little is known about cerebellar changes during early disease stages. In this study, we propose a new multicontrast “connectometry ” approach to assess the structural and functional integrity of cerebellar networks and con-nectivity in early MS. Methods: We used diffusion spectrum and resting-state functional MRI (rs-fMRI) to establish the structural and functional cerebellar connectomes in 28 early relapsing-remitting MS patients and 16 healthy controls (HC). We performed multicontrast “connectometry ” by quantifying multiple MRI Additional Supporting Information may be found in the online
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