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Results 11 - 20
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3,887
Enhancing Search Results of Concept Annotated Documents
"... Concepts describing documents can offer a way for semantically grounding these documents. The goal of the work presented in this paper is to investigate making use of such concepts and the existence of an ontology in order to enhance search results in a known domain. So in this work we experiment wi ..."
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Concepts describing documents can offer a way for semantically grounding these documents. The goal of the work presented in this paper is to investigate making use of such concepts and the existence of an ontology in order to enhance search results in a known domain. So in this work we experiment
Automatically annotating documents with normalized gene lists
, 2005
"... doi:10.1186/1471-2105-6-S1-S13 <supplement> <title> <p>A critical assessment of text mining methods in molecular biology</p> </title> <editor>Christian Blaschke, Lynette Hirschman, Alfonso Valencia, Alexander Yeh</editor> <note>Report</note> < ..."
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;/supplement> Background: Document gene normalization is the problem of creating a list of unique identifiers for genes that are mentioned within a document. Automating this process has many potential applications in both information extraction and database curation systems. Here we present two separate solutions
The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1999
- Nucleic Acids Res
, 1999
"... SWISS-PROT is a curated protein sequence database which strives to provide a high level of annotation (such as the description of the function of a protein, its domain structure, post-translational modifications, variants, etc.), a minimal level of redundancy and high level of integration with other ..."
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Cited by 624 (5 self)
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with other databases. Recent developments of the database include: cross-references to additional databases; a variety of new documentation files and improvements to TrEMBL, a computer annotated supplement to SWISS-PROT. TrEMBL consists of entries in SWISS-PROT-like format derived from the translation of all
The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000
- Nucleic Acids Res
, 2000
"... SWISS-PROT is a curated protein sequence database which strives to provide a high level of annotation (such as the description of the function of a protein, its domains structure, post-translational modifications, variants, etc.), a minimal level of redundancy and high level of integration with othe ..."
Abstract
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Cited by 773 (21 self)
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with other databases. Recent developments of the database include format and content enhancements, cross-references to additional databases, new documentation files and improvements to TrEMBL, a computer-annotated supplement to SWISS-PROT. TrEMBL consists of entries in SWISS-PROT-like format derived from
Annotea: An Open RDF Infrastructure for Shared Web Annotations
, 2001
"... Annotea is a Web-based shared annotation system based on a general-purpose open RDF infrastructure, where annotations are modeled as a class of metadata. Annotations are viewed as statements made by an author about a Web document. Annotations are external to the documents and can be stored in one or ..."
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Cited by 375 (3 self)
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Annotea is a Web-based shared annotation system based on a general-purpose open RDF infrastructure, where annotations are modeled as a class of metadata. Annotations are viewed as statements made by an author about a Web document. Annotations are external to the documents and can be stored in one
Growing Triples on Trees: an XML-RDF Hybrid Model for Annotated Documents
"... Content on today’s Web is typically document-structured and richly connected; XML is by now widely adopted to represent Web data. Moreover, the vision of a computerunderstandable Web relies on Web (and real world) resources described by simple properties having names or values; URIs are the normativ ..."
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Cited by 8 (5 self)
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are the normative method of identifying resources and RDF (the Resource Description Framework) enjoys important traction as a way to encode such statements. We present XR, a carefully designed hybrid model between XML and RDF, for describing RDF-annotated XML documents. XR follows and combines the W3C’s XML, URI
MOMRESP: A Bayesian Model for Multi-Annotator Document Labeling
"... Data annotation in modern practice often involves multiple, imperfect human annotators. Multiple annotations can be used to infer estimates of the ground-truth labels and to estimate individual annotator error characteristics (or reliability). We introduce MOMRESP, a model that improves upon item re ..."
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Cited by 1 (1 self)
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response models to incorporate information from both natural data clusters as well as annotations from multiple annotators to infer ground-truth labels for the document classification task. We implement this model and show that MOMRESP can use unlabeled data to improve estimates of the ground-truth labels
Extending standoff annotation Using XStandoff 2 for multi-layer annotations of multimodal and pre-annotated documents
"... Abstract Information encoding is often complex. Textual information is sometimes accompanied by additional encodings (such as visuals). These multimodal documents may be interesting objects of investigation for linguistics. Another class of complex documents are pre-annotated documents. Classic XML ..."
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Abstract Information encoding is often complex. Textual information is sometimes accompanied by additional encodings (such as visuals). These multimodal documents may be interesting objects of investigation for linguistics. Another class of complex documents are pre-annotated documents. Classic
OntoPop or how to annotate documents and populate ontologies from texts
- In Proceedings of the Workshop on Mastering the Gap: From Information Extraction to Semantic Representation (ESWC’06
, 2006
"... from texts ..."
Results 11 - 20
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3,887
