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  Optimal Design for the Evolution of Composite Mappings

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by Hideaki Suzuki
http://www.hip.atr.co.jp/~hsuzuki/body/papers/2001.01_AROB.ps.gz
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Abstract:

As an example of the optimization of an evolutionary system design, a composite mapping problem is studied. In this problem, the system's basic design is determined by a set of elementary characters and their functions (mappings). Based on a certain definition for the functionality of a phenotypic mapping, a modified measure of system evolvability is proposed, and by maximizing this measure, the elementary function (mapping) set is optimized. A numerical experiment is also conducted in which the evolution is simulated using a set of genotypic entities, and the functional evolvability after optimization is compared to that before optimization.

Citations

244 An approach to the synthesis of life – Ray - 1992
46 A classification of long-term evolutionary dynamics – Bedau, Snyder, et al. - 1998
42 Measurement of evolutionary activity, teleology, and life – Bedau, Packard - 1992
7 Evolution of self-reproducing programs in a core propelled by parallel protein execution – Suzuki - 2000
6 On self-reproduction and evolvability – Taylor - 1999
5 An Approach to Biological Computation: Unicellular Core-Memory Creatures Evolved Using Genetic Algorithms – Suzuki - 2000
4 The evolution and understanding of biological complexity from an algebraic perspective – Nehaniv, Rhodes - 2000
4 Evolvability Analysis: Distribution of Hyperblobs in a Variable-Length Protein Genotype Space – Suzuki - 2000
3 Evolvability checkpoints against evolutionary pathologies – Altenberg - 2000
3 Minimum Density of Functional Proteins to Make a System Evolvable – Suzuki
2 C.: Measures of evolvability in tierra – Ray, Xu
2 Evolvability Analysis Using Random Graph Theory – Suzuki
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