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103
Efficient Parallel Set-Similarity Joins Using MapReduce
"... In this paper we study how to efficiently perform set-similarity joins in parallel using the popular MapReduce framework. We propose a 3-stage approach for end-to-end setsimilarity joins. We take as input a set of records and output a set of joined records based on a set-similarity condition. We eff ..."
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Cited by 109 (7 self)
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In this paper we study how to efficiently perform set-similarity joins in parallel using the popular MapReduce framework. We propose a 3-stage approach for end-to-end setsimilarity joins. We take as input a set of records and output a set of joined records based on a set-similarity condition. We efficiently partition the data across nodes in order to balance the workload and minimize the need for replication. We study both self-join and R-S join cases, and show how to carefully control the amount of data kept in main memory on each node. We also propose solutions for the case where, even if we use the most fine-grained partitioning, the data still does not fit in the main memory of a node. We report results from extensive experiments on real datasets, synthetically increased in size, to evaluate the speedup and scaleup properties of the proposed algorithms using Hadoop. Categories and Subject Descriptors H.2.4 [Database Management]: Systems—query processing, parallel databases
Ed-Join: An Efficient Algorithm for Similarity Joins With Edit Distance Constraints
, 2008
"... There has been considerable interest in similarity join in the research community recently. Similarity join is a fundamental operation in many application areas, such as data integration and cleaning, bioinformatics, and pattern recognition. We focus on efficient algorithms for similarity join with ..."
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Cited by 72 (8 self)
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There has been considerable interest in similarity join in the research community recently. Similarity join is a fundamental operation in many application areas, such as data integration and cleaning, bioinformatics, and pattern recognition. We focus on efficient algorithms for similarity join with edit distance constraints. Existing approaches are mainly based on converting the edit distance constraint to a weaker constraint on the number of matching q-grams between pair of strings. In this paper, we propose the novel perspective of investigating mismatching q-grams. Technically, we derive two new edit distance lower bounds by analyzing the locations and contents of mismatching q-grams. A new algorithm, Ed-Join, is proposed that exploits the new mismatch-based filtering methods; it achieves substantial reduction of the candidate sizes and hence saves computation time. We demonstrate experimentally that the new algorithm outperforms alternative methods on large-scale real datasets under a wide range of parameter settings.
Efficient Interactive Fuzzy Keyword Search
- WWW '09 PROCEEDINGS OF THE 18TH INTERNATIONAL CONFERENCE ON WORLD WIDE WEB
, 2009
"... Traditional information systems return answers after a user submits a complete query. Users often feel “left in the dark” when they have limited knowledge about the underlying data, and have to use a try-and-see approach for finding information. A recent trend of supporting autocomplete in these sys ..."
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Cited by 63 (21 self)
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Traditional information systems return answers after a user submits a complete query. Users often feel “left in the dark” when they have limited knowledge about the underlying data, and have to use a try-and-see approach for finding information. A recent trend of supporting autocomplete in these systems is a first step towards solving this problem. In this paper, we study a new information-access paradigm, called “interactive, fuzzy search,” in which the system searches the underlying data “on the fly” as the user types in query keywords. It extends autocomplete interfaces by (1) allow- ing keywords to appear in multiple attributes (in an arbi- trary order) of the underlying data; and (2) finding relevant records that have keywords matching query keywords ap- proximately. This framework allows users to explore data as they type, even in the presence of minor errors. We study research challenges in this framework for large amounts of data. Since each keystroke of the user could invoke a query on the backend, we need efficient algorithms to process each query within milliseconds. We develop various incremental- search algorithms using previously computed and cached re- sults in order to achieve an interactive speed. We have deployed several real prototypes using these techniques. One of them has been deployed to support interactive search on the UC Irvine people directory, which has been used regularly and well received by users due to its friendly interface and high efficiency.
Top-k Set Similarity Joins
"... Abstract — Similarity join is a useful primitive operation underlying many applications, such as near duplicate Web page detection, data integration, and pattern recognition. Traditional similarity joins require a user to specify a similarity threshold. In this paper, we study a variant of the simil ..."
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Cited by 42 (2 self)
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Abstract — Similarity join is a useful primitive operation underlying many applications, such as near duplicate Web page detection, data integration, and pattern recognition. Traditional similarity joins require a user to specify a similarity threshold. In this paper, we study a variant of the similarity join, termed top-k set similarity join. It returns the top-k pairs of records ranked by their similarities, thus eliminating the guess work users have to perform when the similarity threshold is unknown before hand. An algorithm, topk-join, is proposed to answer top-k similarity join efficiently. It is based on the prefix filtering principle and employs tight upper bounding of similarity values of unseen pairs. Experimental results demonstrate the efficiency of the proposed algorithm on large-scale real datasets. I.
Efficient Approximate Entity Extraction with Edit Distance Constraints
"... Named entity recognition aims at extracting named entities from unstructured text. A recent trend of named entity recognition is finding approximate matches in the text with respect to a large dictionary of known entities, as the domain knowledge encoded in the dictionary helps to improve the extrac ..."
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Cited by 36 (8 self)
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Named entity recognition aims at extracting named entities from unstructured text. A recent trend of named entity recognition is finding approximate matches in the text with respect to a large dictionary of known entities, as the domain knowledge encoded in the dictionary helps to improve the extraction performance. In this paper, we study the problem of approximate dictionary matching with edit distance constraints. Compared to existing studies using token-based similarity constraints, our problem definition enables us to capture typographical or orthographical errors, both of which are common in entity extraction tasks yet may be missed by token-based similarity constraints. Our problem is technically challenging as existing approaches based on q-gram filtering have poor performance due to the existence of many short entities in the dictionary. Our proposed solution is based on an improved neighborhood generation method employing novel partitioning and prefix pruning techniques. We also propose an efficient document processing algorithm that minimizes unnecessary comparisons and enumerations and hence achieves good scalability. We have conducted extensive experiments on several publicly available named entity recognition datasets. The proposed algorithm outperforms alternative approaches by up to an order of magnitude.
Automatically generating data linkages using a domainindependent candidate selection approach
- In Proceedings of International Semantic Web Conference (ISWC
, 2011
"... Abstract. One challenge for Linked Data is scalably establishing high-quality owl:sameAs links between instances (e.g., people, geographical locations, publications, etc.) in different data sources. Traditional ap-proaches to this entity coreference problem do not scale because they exhaustively com ..."
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Cited by 35 (3 self)
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Abstract. One challenge for Linked Data is scalably establishing high-quality owl:sameAs links between instances (e.g., people, geographical locations, publications, etc.) in different data sources. Traditional ap-proaches to this entity coreference problem do not scale because they exhaustively compare every pair of instances. In this paper, we pro-pose a candidate selection algorithm for pruning the search space for entity coreference. We select candidate instance pairs by computing a character-level similarity on discriminating literal values that are chosen using domain-independent unsupervised learning. We index the instances on the chosen predicates ’ literal values to efficiently look up similar in-stances. We evaluate our approach on two RDF and three structured datasets. We show that the traditional metrics don’t always accurately reflect the relative benefits of candidate selection, and propose additional metrics. We show that our algorithm frequently outperforms alternatives and is able to process 1 million instances in under one hour on a single Sun Workstation. Furthermore, on the RDF datasets, we show that the entire entity coreference process scales well by applying our technique. Surprisingly, this high recall, low precision filtering mechanism frequently leads to higher F-scores in the overall system.
Space-constrained gram-based indexing for efficient approximate string search
, 2008
"... Answering approximate queries on string collections is important in applications such as data cleaning, query relaxation, and spell checking, where inconsistencies and errors exist in user queries as well as data. Many existing algorithms use gram-based inverted-list indexing structures to answer ..."
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Cited by 28 (3 self)
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Answering approximate queries on string collections is important in applications such as data cleaning, query relaxation, and spell checking, where inconsistencies and errors exist in user queries as well as data. Many existing algorithms use gram-based inverted-list indexing structures to answer approximate string queries. These indexing structures are “notoriously” large compared to the size of their original string collection. In this paper, we study how to reduce the size of such an indexing structure to a given amount of space, while retaining efficient query processing. We first study how to adopt existing inverted-list compression techniques to solve our problem. Then, we propose two novel approaches for achieving the goal: one is based on discarding gram lists, and one is based on combining correlated lists. They are both orthogonal to existing compression techniques, exploit a unique property of our setting, and offer new opportunities for improving query performance. For each approach we analyze its effect on query performance and develop algorithms for wisely choosing lists to discard or combine. Our extensive experiments on real data sets show that our approaches provide applications the flexibility in deciding the tradeoff between query performance and indexing size, and can outperform existing compression techniques. An interesting and surprising finding is that while we can reduce the index size significantly (up to 60 % reduction) with tolerable performance penalties, for 20-40 % reductions we can even improve query performance compared to original indexes.
Pass-join: A partition-based method for similarity joins
, 2011
"... As an essential operation in data cleaning, the similarity join has attracted considerable attention from the database com-munity. In this paper, we study string similarity joins with edit-distance constraints, which find similar string pairs from two large sets of strings whose edit distance is wit ..."
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Cited by 27 (13 self)
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As an essential operation in data cleaning, the similarity join has attracted considerable attention from the database com-munity. In this paper, we study string similarity joins with edit-distance constraints, which find similar string pairs from two large sets of strings whose edit distance is within a given threshold. Existing algorithms are efficient either for short strings or for long strings, and there is no algorithm that can efficiently and adaptively support both short strings and long strings. To address this problem, we propose a partition-based method called Pass-Join. Pass-Join par-titions a string into a set of segments and creates inverted indices for the segments. Then for each string, Pass-Join selects some of its substrings and uses the selected substrings to find candidate pairs using the inverted indices. We devise efficient techniques to select the substrings and prove that our method can minimize the number of selected substrings. We develop novel pruning techniques to efficiently verify the candidate pairs. Experimental results show that our algo-rithms are efficient for both short strings and long strings, and outperform state-of-the-art methods on real datasets. 1.
Efficient K-Nearest Neighbor Graph Construction for Generic Similarity Measures
"... K-Nearest Neighbor Graph (K-NNG) construction is an important operation with many web related applications, including collaborative filtering, similarity search, and many others in data mining and machine learning. Existing methods for K-NNG construction either do not scale, or are specific to certa ..."
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Cited by 27 (0 self)
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K-Nearest Neighbor Graph (K-NNG) construction is an important operation with many web related applications, including collaborative filtering, similarity search, and many others in data mining and machine learning. Existing methods for K-NNG construction either do not scale, or are specific to certain similarity measures. We present NN-Descent, a simple yet efficient algorithm for approximate K-NNG construction with arbitrary similarity measures. Our method is based on local search, has minimal space overhead and does not rely on any shared global index. Hence, it is especially suitable for large-scale applications where data structures need to be distributed over the network. We have shown with a variety of datasets and similarity measures that the proposed method typically converges to above 90 % recall with each point comparing only to several percent of the whole dataset on average.
