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Quantitative characterization of intrinsic disorder in polyglutamine: insights from analysis based on polymer theories (2007)

by A Vitalis, X Wang, R V Pappu
Venue:Biophys. J
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Molecular Cell Article Opposing Effects of Glutamine and Asparagine Govern Prion Formation by Intrinsically Disordered Proteins

by Al Halfmann, Simon Alberti, Rajaraman Krishnan, Nicholas Lyle, Charles W. O’donnell, Susan Lindquist
"... Sequences rich in glutamine (Q) and asparagine (N) residues often fail to fold at the monomer level. This, coupled to their unusual hydrogen-bonding abilities, provides the driving force to switch between disordered monomers and amyloids. Such transitions govern processes as diverse as human protein ..."
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Sequences rich in glutamine (Q) and asparagine (N) residues often fail to fold at the monomer level. This, coupled to their unusual hydrogen-bonding abilities, provides the driving force to switch between disordered monomers and amyloids. Such transitions govern processes as diverse as human protein-folding diseases, bacterial biofilm assembly, and the inheritance of yeast prions (protein-based genetic elements). A systematic survey of prionforming domains suggested that Q and N residues have distinct effects on amyloid formation. Here, we use cell biological, biochemical, and computational techniques to compare Q/N-rich protein variants, replacing Ns with Qs and Qs with Ns. We find that the two residues have strong and opposing effects: N richness promotes assembly of benign self-templating amyloids; Q richness promotes formation of toxic nonamyloid conformers. Molecular simulations focusing on intrinsic folding differences between Qs and Ns suggest that their different behaviors are due to the enhanced turn-forming propensity of Ns over Qs.
The National Science Foundation
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