Complex brains have evolved a highly efficient network architecture whose structural connectivity is capable of generating a large repertoire of functional states. We detect characteristic network building blocks (structural and functional motifs) in neuroanatomical data sets and identify a small set of structural motifs that occur in significantly increased numbers. Our analysis suggests the hypothesis that brain networks maximize both the number and the diversity of functional motifs, while the repertoire of structural motifs remains small. Using functional motif number as a cost function in an optimization algorithm, we obtain network topologies that resemble real brain networks across a broad spectrum of structural measures, including small-world attributes. These results are consistent with the hypothesis that highly evolved neural architectures are organized to maximize functional repertoires and to support highly efficient integration of information.

Neuronally plausible, generative or forward models are essential for understanding how event-related fields (ERFs) and potentials (ERPs) are generated. In this paper, we present a new approach to modeling event-related responses measured with EEG or MEG. This approach uses a biologically informed model to make inferences about the underlying neuronal networks generating responses. The approach can be regarded as a neurobiologically constrained source reconstruction scheme, in which the parameters of the reconstruction have an explicit neuronal interpretation. Specifically, these parameters encode, among other things, the coupling among sources and how that coupling depends upon stimulus attributes or experimental context. The basic idea is to supplement conventional electromagnetic forward models, of how sources are expressed in measurement space, with a model of how source activity is generated by neuronal dynamics. A single inversion of this extended forward model enables inference about both the spatial deployment of sources and the underlying neuronal architecture generating them. Critically, this inference covers long-range connections among well-defined neuronal subpopulations. In a previous paper, we simulated ERPs using a hierarchical neural-mass model that embodied bottom-up, top-down and lateral connections among remote regions. In this paper, we describe a Bayesian procedure to estimate the parameters of this model using empirical data. We demonstrate this procedure by characterizing the role of changes in cortico-cortical coupling, in the genesis of ERPs. In the first experiment, ERPs recorded during the perception of faces and houses were modeled as distinct cortical sources in the ventral visual pathway. Category-selectivity, as indexed by the face-Abbreviations: DCM, dynamic causal Model(ing); EEG, electroencephalography; ERF, event-related field; ERP, event-related potential;

Biological organisms continuously select and sample information used by their neural structures for perception and action, and for creating coherent cognitive states guiding their autonomous behavior. Information processing, however, is not solely an internal function of the nervous system. Here we show, instead, how sensorimotor interaction and body morphology can induce statistical regularities and information structure in sensory inputs and within the neural control architecture, and how the flow of information between sensors, neural units, and effectors is actively shaped by the interaction with the environment. We analyze sensory and motor data collected from real and simulated robots and reveal the presence of information structure and directed information flow induced by dynamically coupled sensorimotor activity, including effects of motor outputs on sensory inputs. We find that information structure and information flow in sensorimotor networks (a) is spatially and temporally specific; (b) can be affected by learning, and (c) can be affected by changes in body morphology. Our results suggest a fundamental link between physical embeddedness and information, highlighting the effects of embodied interactions on internal (neural) information processing, and illuminating the role of various system components on the generation of behavior.

Even in the absence of sensory inputs, cortical and thalamic neurons can show structured patterns of ongoing spontaneous activity, whose origins and functional significance are not well understood. We use computer simulations to explore the conditions under which spontaneous activity emerges from a simplified model of multiple interconnected thalamocortical columns linked by long-range, top-down excitatory axons, and to examine its interactions with stimulus-induced activation. Simulations help characterize two main states of activity. First, spontaneous gamma-band oscillations emerge at a precise threshold controlled by ascending neuromodulator systems. Second, within a spontaneously active network, we observe the sudden ‘‘ignition’ ’ of one out of many possible coherent states of high-level activity amidst cortical neurons with long-distance projections. During such an ignited state, spontaneous activity can block external sensory processing. We relate those properties to experimental observations on the neural bases of endogenous states of consciousness, and particularly the blocking of access to consciousness that occurs in the psychophysical phenomenon of ‘‘inattentional blindness,’ ’ in which normal subjects intensely engaged in mental activity fail to notice salient but irrelevant sensory stimuli. Although highly simplified, the generic properties of a minimal network may help clarify some of the basic cerebral phenomena underlying the autonomy of consciousness. Citation: Dehaene S, Changeux JP (2005) Ongoing spontaneous activity controls access to consciousness: A neuronal model for inattentional blindness. PLoS Biol 3(5): e141.

Large-scale neural networks are thought to be an essential substrate for the implementation of cognitive function by the brain. If so, then a thorough understanding of cognition is not possible without knowledge of how the large-scale neural networks of cognition (neurocognitive networks) operate. Of necessity, such understanding requires insight into structural, functional, and dynamical aspects of network operation, the intimate interweaving of which may be responsible for the intricacies of cognition. Knowledge of anatomical structure is basic to understanding how neurocognitive networks operate. Phylogenetically and ontogenetically determined patterns of synaptic connectivity form a structural network of brain areas, allowing communication between widely distributed collections of areas. The function of neurocognitive networks depends on selective activation of anatomically linked cortical and subcortical areas in a wide variety of configurations. Large-scale functional networks provide the cooperative processing which gives expression to cognitive function. The dynamics of neurocognitive network function relates to the evolving patterns of interacting brain areas that express cognitive function in real time. This article considers the proposition that a basic similarity of the structural, functional, and dynamical features of all neurocognitive networks in the brain causes them to function according to common operational principles. The formation of neural context through the coordinated mutual constraint of multiple interacting cortical areas, is considered as a guiding principle underlying all cognitive functions. Increasing knowledge of the operational principles of neurocognitive networks is likely to promote the advancement of cognitive theories, and to seed strategies for the enhancement of cognitive abilities.

Multivariate time series analysis is extensively used in neurophysiology with the aim of studying the relationship between simultaneously recorded signals. Recently, advances on information theory and nonlinear dynamical systems theory have allowed the study of various types of synchronization from time series. In this work, we first describe the multivariate linear methods most commonly used in neurophysiology and show that they can be extended to assess the existence of nonlinear interdependences between signals. We then review the concepts of entropy and mutual information followed by a detailed description of nonlinear methods based on the concepts of phase synchronization, generalized synchronization and event synchronization. In all cases, we show how to apply these methods to study different kinds of neurophysiological data. Finally, we illustrate the use of multivariate surrogate data test for the assessment of the strength (strong or weak) and the type (linear or nonlinear) of interdependence between neurophysiological signals.

This paper describes a dynamic causal model (DCM) for induced or spectral responses as measured with the electroencephalogram (EEG) or the magnetoencephalogram (MEG). We model the time-varying power, over a range of frequencies, as the response of a distributed system of coupled electromagnetic sources to a spectral perturbation. The model parameters encode the frequency response to exogenous input and coupling among sources and different frequencies. The Bayesian inversion of this model, given data enables inferences about the parameters of a particular model and allows us to compare different models, or hypotheses. One key aspect of the model is that it differentiates between linear and non-linear coupling; which correspond to within and betweenfrequency coupling respectively. To establish the face validity of our approach, we generate synthetic data and test the identifiability of various parameters to ensure they can be estimated accurately, under different levels of noise. We then apply our model to EEG data from a faceperception experiment, to ask whether there is evidence for non-linear coupling between early visual cortex and fusiform areas.

(Received xxx; revised xxx; accepted xxx) Q1 Starting from the hypothesis that the mammalian neocortex to a first approximation functions as an associative memory of the attractor network type, we formulate a quantitative computational model of neocortical layers 2/3. The model employs biophysically detailed multi-compartmental model neurons and conductance based synapses and includes pyramidal cells and two types of inhibitory interneurons, i.e., regular spiking non-pyramidal cells and basket cells. The simulated network has a minicolumnar as well as a hypercolumnar modular structure and we propose that minicolumns rather than single cells are the basic computational units in neocortex. The minicolumns are represented in full scale and synaptic input to the different types of model neurons is carefully matched to reproduce experimentally measured values and to allow a quantitative reproduction of dynamic single cell behavior. Several key phenomena seen experimentally in vitro and in vivo appear as emergent features of this model. It exhibits a robust and fast attractor dynamics with pattern completion and pattern rivalry and it suggests an explanation for the so-called attentional blink phenomenon. During assembly dynamics, the model faithfully reproduces several features of local UP states, as they have been experimentally observed in vitro, aswell as oscillatory behavior similar to that observed in the neocortex.

We compared conscious and nonconscious processing of briefly flashed words using a visual masking procedure while recording intracranial electroencephalogram (iEEG) in ten patients. Nonconscious processing of masked words was observed in multiple cortical areas, mostly within an early time window (,300 ms), accompanied by induced gammaband activity, but without coherent long-distance neural activity, suggesting a quickly dissipating feedforward wave. In contrast, conscious processing of unmasked words was characterized by the convergence of four distinct neurophysiological markers: sustained voltage changes, particularly in prefrontal cortex, large increases in spectral power in the gamma band, increases in long-distance phase synchrony in the beta range, and increases in long-range Granger causality. We argue that all of those measures provide distinct windows into the same distributed state of conscious processing. These results have a direct impact on current theoretical discussions concerning the neural correlates of conscious access.

The premotor cortex is well known for its role in motor planning. In addition, recent studies have shown that it is also involved in nonmotor functions such as attention and memory, a notion derived from both animal neurophysiology and human functional imaging. The present study is an attempt to bridge the gap between these experimental techniques in the human brain, using a task initially designed to dissociate attention from intention in the monkey, and recently adapted for a functional magnetic resonance imaging (fMRI) study [Simon,