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Optimization transfer approach to joint registration/reconstruction for motion-compensated image reconstruction,” in Biomedical Imaging: From Nano to Macro, (2010)

by J Fessler
Venue:IEEE International Symposium on. IEEE,
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Unified reconstruction and motion estimation in cardiac perfusion MRI

by Sajan G Lingala , Mariappan Nadar , Christophe Chefd'hotel , Li Zhang , Mathews Jacob - Chicago: Proceeding in IEEE International Symposium on Biomedical Imaging; 2011
"... ABSTRACT We introduce a novel unifying approach to jointly estimate the motion and the dynamic images in first pass cardiac perfusion MR imaging. We formulate the recovery as an energy minimization scheme using a unified objective function that combines data consistency, spatial smoothness, motion ..."
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ABSTRACT We introduce a novel unifying approach to jointly estimate the motion and the dynamic images in first pass cardiac perfusion MR imaging. We formulate the recovery as an energy minimization scheme using a unified objective function that combines data consistency, spatial smoothness, motion and contrast dynamics penalties. We introduce a variable splitting strategy to simplify the objective function into multiple sub problems, which are solved using simple algorithms. These sub-problems are solved in an iterative manner using efficient continuation strategies. Preliminary validation using a numerical phantom and in-vivo perfusion data demonstrate the utility of the proposed scheme in recovering the perfusion images from considerably under-sampled data.
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...ampled reference frames, collected before and after the dynamic acquisition. The residuals are then reconstructed from under-sampled k-space data using k ! t FOCUSS. Unlike cine MRI, the contrast of the dynamic images are significantly different from the reference images. Hence, the subtraction of the deformed reference image may not generate sparse residuals. Moreover, more complex mutual information similarity measures may be needed for the registration. Fessler recently introduced an elegant energy minimization framework to reconstruct a static image of a moving organ from its measurements [3]. The formulation of the problem as a unified energy minimization scheme enables the appreciation of the tradeoffs in the modeling. However, this scheme is not designed to recover image time series with dynamic contrast variations. We introduce a novel energy minimization formulation for the joint estimation of the deformation and the images in myocardial perfusion imaging. We model the respiratory motion as an elastic deformation, whose parameters are estimated from the data. We assume the contrast variations due to bolus passage to be smooth in time, once the respiratory motion is removed. T...

Numerical Methods for Coupled Reconstruction and Registration in Digital Breast Tomosynthesis

by Guang Yang, John H. Hipwell, David J. Hawkes, Simon R. Arridge
"... www.cs.ucl.ac.uk/people/G.Yang.html Digital Breast Tomosynthesis (DBT) provides an insight into the fine details of normal fibroglandular tissues and abnormal lesions by reconstructing a pseudo-3D image of the breast. In this respect, DBT overcomes a major limitation of conventional X-ray mammograph ..."
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www.cs.ucl.ac.uk/people/G.Yang.html Digital Breast Tomosynthesis (DBT) provides an insight into the fine details of normal fibroglandular tissues and abnormal lesions by reconstructing a pseudo-3D image of the breast. In this respect, DBT overcomes a major limitation of conventional X-ray mammography by reducing the confounding effects caused by the superposition of breast tissue. In a breast cancer screening or diagnostic context, a radiologist is interested in detecting change, which might be indicative of malignant disease. To help automate this task image registration is required to establish spatial correspondence between time points. Typically, images, such as MRI or CT, are first reconstructed and then registered. This approach can be effective if reconstructing using a complete set of data. However, for ill-posed, limited-angle problems such as DBT, estimating the deformation is complicated by the significant artefacts associated with the reconstruction, leading to severe inaccuracies in the registration. This paper presents a mathematical framework, which couples the two tasks and
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...d Decoupled Conjugate Gradient 5 LR images Yap et al. 2009 SR 2D Rigid Decoupled Linear Interior Point 5 LR images Jacobson and Fessler 2003 PET 3D Affine Decoupled Gradient Descent 64 fwdProjs 180 o =-=Fessler 2010-=- PET 3D – Decoupled Conjugate Gradient – Odille et al. 2008 MRI 3D Affine Decoupled GMRES – Schumacher et al. 2009 SPECT 3D Rigid Decoupled Gauss-Newton 60 to 64 fwdProjs 360 o Yang et al. 2005 Cryo-E...

dynamic

by Sajan Goud Lingala, Student Member, Edward Dibella, Mathews Jacob, Senior Member
"... 1Deformation corrected compressed sensing ..."
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1Deformation corrected compressed sensing
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...33]. Our unified energy minimization formulation is conceptually related to the elegant work by Fessler et. al. in the context of reconstructing a static image of a moving organ from its measurements =-=[34]-=-. However, the framework in [34] is not designed to recover image time series with dynamic contrast variations. June 2, 2014 DRAFT 5The rest of the paper is organized as described. In sections II, III...

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by unknown authors
"... Abstract—The likelihood of finding manufactured components (surgical tools, implants, etc.) within a tomographic field-of-view has been steadily increasing. One reason is the aging population and proliferation of prosthetic devices, such that more people undergoing diagnostic imaging have existing i ..."
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Abstract—The likelihood of finding manufactured components (surgical tools, implants, etc.) within a tomographic field-of-view has been steadily increasing. One reason is the aging population and proliferation of prosthetic devices, such that more people undergoing diagnostic imaging have existing implants, particularly hip and knee implants. Another reason is that use of intraoperative imaging (e.g., cone-beam CT) for surgical guidance is increasing, wherein surgical tools and devices such as screws and plates are placed within or near to the target anatomy. When these components contain metal, the reconstructed volumes are likely to contain severe artifacts that adversely affect the image quality in tissues both near and far from the component. Because physical models of such components exist, there is a unique opportunity to integrate this knowledge into the reconstruction algorithm to reduce these artifacts. We present a model-based

514 PUBLICATIONS 16,567 CITATIONS SEE PROFILE

by Yoshito Otake, Jerry Prince, A. Jay Khanna , 2012
"... Abstract—The likelihood of finding manufactured components (surgical tools, implants, etc.) within a tomographic field-of-view has been steadily increasing. One reason is the aging population and proliferation of prosthetic devices, such that more people undergoing diagnostic imaging have existing i ..."
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Abstract—The likelihood of finding manufactured components (surgical tools, implants, etc.) within a tomographic field-of-view has been steadily increasing. One reason is the aging population and proliferation of prosthetic devices, such that more people undergoing diagnostic imaging have existing implants, particularly hip and knee implants. Another reason is that use of intraoperative imaging (e.g., cone-beam CT) for surgical guidance is increasing, wherein surgical tools and devices such as screws and plates are placed within or near to the target anatomy. When these components contain metal, the reconstructed volumes are likely to contain severe artifacts that adversely affect the image quality in tissues both near and far from the component. Because physical models of such components exist, there is a unique opportunity to integrate this knowledge into the reconstruction algorithm to reduce these artifacts. We present a model-based
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