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6,793
SARA: a server for function annotation of RNA structures
 Nucleic Acids Res
, 2009
"... Recent interest in noncoding RNA transcripts has resulted in a rapid increase of deposited RNA structures in the Protein Data Bank. However, a characterization and functional classification of the RNA structure and function space have only been partially addressed. Here, we introduce the SARA progr ..."
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Cited by 12 (1 self)
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program for pairwise alignment of RNA structures as a web server for structurebased RNA function assignment. The SARA server relies on the SARA program, which aligns two RNA structures based on a unitvector rootmeansquare approach. The likely accuracy of the SARA alignments is assessed by three
The Dantzig selector: statistical estimation when p is much larger than n
, 2005
"... In many important statistical applications, the number of variables or parameters p is much larger than the number of observations n. Suppose then that we have observations y = Ax + z, where x ∈ R p is a parameter vector of interest, A is a data matrix with possibly far fewer rows than columns, n ≪ ..."
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Cited by 879 (14 self)
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, where r is the residual vector y − A˜x and t is a positive scalar. We show that if A obeys a uniform uncertainty principle (with unitnormed columns) and if the true parameter vector x is sufficiently sparse (which here roughly guarantees that the model is identifiable), then with very large probability
Motivation through the Design of Work: Test of a Theory. Organizational Behavior and Human Performance,
, 1976
"... A model is proposed that specifies the conditions under which individuals will become internally motivated to perform effectively on their jobs. The model focuses on the interaction among three classes of variables: (a) the psychological states of employees that must be present for internally motiv ..."
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Cited by 622 (2 self)
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of the work 254 HACKMAN AND OLDHAM setting and the device of the autonomous work group. Absent from the approach, for example, are explicit means for diagnosing a work system prior to change (to ascertain what "should" be changed, and how), or for evaluating in systematic terms the outcomes
Testing for Common Trends
 Journal of the American Statistical Association
, 1988
"... Cointegrated multiple time series share at least one common trend. Two tests are developed for the number of common stochastic trends (i.e., for the order of cointegration) in a multiple time series with and without drift. Both tests involve the roots of the ordinary least squares coefficient matrix ..."
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Cited by 464 (7 self)
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has k unit roots and n k distinct stationary linear combinations. Our proposed tests can be viewed alternatively as tests of the number of common trends, linearly independent cointegrating vectors, or autoregressive unit roots of the vector process. Both of the proposed tests are asymptotically
Iterative (turbo) soft interference cancellation and decoding for coded CDMA
 IEEE Trans. Commun
, 1999
"... Abstract — The presence of both multipleaccess interference (MAI) and intersymbol interference (ISI) constitutes a major impediment to reliable communications in multipath codedivision multipleaccess (CDMA) channels. In this paper, an iterative receiver structure is proposed for decoding multiuse ..."
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Cited by 456 (18 self)
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computational complexity. A lowcomplexity SISO multiuser detector is developed based on a novel nonlinear interference suppression technique, which makes use of both soft interference cancellation and instantaneous linear minimum meansquare error filtering. The properties of such a nonlinear interference
Concept Decompositions for Large Sparse Text Data using Clustering
 Machine Learning
, 2000
"... . Unlabeled document collections are becoming increasingly common and available; mining such data sets represents a major contemporary challenge. Using words as features, text documents are often represented as highdimensional and sparse vectorsa few thousand dimensions and a sparsity of 95 to 99 ..."
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Cited by 407 (27 self)
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to 99% is typical. In this paper, we study a certain spherical kmeans algorithm for clustering such document vectors. The algorithm outputs k disjoint clusters each with a concept vector that is the centroid of the cluster normalized to have unit Euclidean norm. As our first contribution, we
An Efficient kMeans Clustering Algorithm: Analysis and Implementation
, 2000
"... Kmeans clustering is a very popular clustering technique, which is used in numerous applications. Given a set of n data points in R d and an integer k, the problem is to determine a set of k points R d , called centers, so as to minimize the mean squared distance from each data point to its ..."
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Cited by 417 (4 self)
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Kmeans clustering is a very popular clustering technique, which is used in numerous applications. Given a set of n data points in R d and an integer k, the problem is to determine a set of k points R d , called centers, so as to minimize the mean squared distance from each data point to its
A Growing Neural Gas Network Learns Topologies
 Advances in Neural Information Processing Systems 7
, 1995
"... An incremental network model is introduced which is able to learn the important topological relations in a given set of input vectors by means of a simple Hebblike learning rule. In contrast to previous approaches like the "neural gas" method of Martinetz and Schulten (1991, 1994), this m ..."
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Cited by 401 (5 self)
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An incremental network model is introduced which is able to learn the important topological relations in a given set of input vectors by means of a simple Hebblike learning rule. In contrast to previous approaches like the "neural gas" method of Martinetz and Schulten (1991, 1994
Inference in Linear Time Series Models with Some Unit Roots,”
 Econometrica
, 1990
"... This paper considers estimation and hypothesis testing in linear time series models when some or all of the variables have unit roots. Our motivating example is a vector autoregression with some unit roots in the companion matrix, which might include polynomials in time as regressors. In the genera ..."
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Cited by 390 (14 self)
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This paper considers estimation and hypothesis testing in linear time series models when some or all of the variables have unit roots. Our motivating example is a vector autoregression with some unit roots in the companion matrix, which might include polynomials in time as regressors
The curvelet transform for image denoising
 IEEE TRANS. IMAGE PROCESS
, 2002
"... We describe approximate digital implementations of two new mathematical transforms, namely, the ridgelet transform [2] and the curvelet transform [6], [5]. Our implementations offer exact reconstruction, stability against perturbations, ease of implementation, and low computational complexity. A cen ..."
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Cited by 404 (40 self)
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central tool is Fourierdomain computation of an approximate digital Radon transform. We introduce a very simple interpolation in Fourier space which takes Cartesian samples and yields samples on a rectopolar grid, which is a pseudopolar sampling set based on a concentric squares geometry. Despite
Results 1  10
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