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Approximating discrete probability distributions with dependence trees
 IEEE TRANSACTIONS ON INFORMATION THEORY
, 1968
"... A method is presented to approximate optimally an ndimensional discrete probability distribution by a product of secondorder distributions, or the distribution of the firstorder tree dependence. The problem is to find an optimum set of n1 first order dependence relationship among the n variables ..."
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Cited by 881 (0 self)
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A method is presented to approximate optimally an ndimensional discrete probability distribution by a product of secondorder distributions, or the distribution of the firstorder tree dependence. The problem is to find an optimum set of n1 first order dependence relationship among the n
Generation and Synchronous TreeAdjoining Grammars
, 1990
"... Treeadjoining grammars (TAG) have been proposed as a formalism for generation based on the intuition that the extended domain of syntactic locality that TAGs provide should aid in localizing semantic dependencies as well, in turn serving as an aid to generation from semantic representations. We dem ..."
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Cited by 774 (43 self)
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Treeadjoining grammars (TAG) have been proposed as a formalism for generation based on the intuition that the extended domain of syntactic locality that TAGs provide should aid in localizing semantic dependencies as well, in turn serving as an aid to generation from semantic representations. We
Random forests
 Machine Learning
, 2001
"... Abstract. Random forests are a combination of tree predictors such that each tree depends on the values of a random vector sampled independently and with the same distribution for all trees in the forest. The generalization error for forests converges a.s. to a limit as the number of trees in the fo ..."
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Cited by 3613 (2 self)
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Abstract. Random forests are a combination of tree predictors such that each tree depends on the values of a random vector sampled independently and with the same distribution for all trees in the forest. The generalization error for forests converges a.s. to a limit as the number of trees
Muscle: multiple sequence alignment with high accuracy and high throughput
 NUCLEIC ACIDS RES
, 2004
"... We describe MUSCLE, a new computer program for creating multiple alignments of protein sequences. Elements of the algorithm include fast distance estimation using kmer counting, progressive alignment using a new profile function we call the logexpectation score, and refinement using treedependent r ..."
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Cited by 2509 (7 self)
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We describe MUSCLE, a new computer program for creating multiple alignments of protein sequences. Elements of the algorithm include fast distance estimation using kmer counting, progressive alignment using a new profile function we call the logexpectation score, and refinement using treedependent
Treedependent component analysis
 In Uncertainty in Artificial Intelligence: Proceedings of the Eighteenth Conference (UAI2002
, 2002
"... We present a generalization of independent component analysis (ICA), where instead of looking for a linear transform that makes the data components independent, we look for a transform that makes the data components well fit by a treestructured graphical model. Treating the problem as a semiparamet ..."
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Cited by 13 (2 self)
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estimation, and another using kernel generalized variance. This treedependent component analysis framework leads naturally to an efficient general multivariate density estimation technique where only bivariate density estimation needs to be performed. 1
A New Statistical Parser Based on Bigram Lexical Dependencies
, 1996
"... This paper describes a new statistical parser which is based on probabilities of dependencies between headwords in the parse tree. Standard bigram probability estimation techniques are extended to calculate probabilities of dependencies between pairs of words. Tests using Wall Street Journal ..."
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Cited by 490 (4 self)
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This paper describes a new statistical parser which is based on probabilities of dependencies between headwords in the parse tree. Standard bigram probability estimation techniques are extended to calculate probabilities of dependencies between pairs of words. Tests using Wall Street
Multiple sequence alignment with the Clustal series of programs
 Nucleic Acids Res
, 2003
"... The Clustal series of programs are widely used in molecular biology for the multiple alignment of both nucleic acid and protein sequences and for preparing phylogenetic trees. The popularity of the programs depends on a number of factors, including not only the accuracy of the results, but also the ..."
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Cited by 747 (5 self)
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The Clustal series of programs are widely used in molecular biology for the multiple alignment of both nucleic acid and protein sequences and for preparing phylogenetic trees. The popularity of the programs depends on a number of factors, including not only the accuracy of the results, but also
Large margin methods for structured and interdependent output variables
 JOURNAL OF MACHINE LEARNING RESEARCH
, 2005
"... Learning general functional dependencies between arbitrary input and output spaces is one of the key challenges in computational intelligence. While recent progress in machine learning has mainly focused on designing flexible and powerful input representations, this paper addresses the complementary ..."
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Cited by 624 (12 self)
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the complementary issue of designing classification algorithms that can deal with more complex outputs, such as trees, sequences, or sets. More generally, we consider problems involving multiple dependent output variables, structured output spaces, and classification problems with class attributes. In order
An Architecture for WideArea Multicast Routing
"... Existing multicast routing mechanisms were intended for use within regions where a group is widely represented or bandwidth is universally plentiful. When group members, and senders to those group members, are distributed sparsely across a wide area, these schemes are not efficient; data packets or ..."
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Cited by 534 (22 self)
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or membership report information are occasionally sent over many links that do not lead to receivers or senders, respectively. We have developed a multicast routing architecture that efficiently establishes distribution trees across wide area internets, where many groups will be sparsely represented. Efficiency
Fusion, Propagation, and Structuring in Belief Networks
 ARTIFICIAL INTELLIGENCE
, 1986
"... Belief networks are directed acyclic graphs in which the nodes represent propositions (or variables), the arcs signify direct dependencies between the linked propositions, and the strengths of these dependencies are quantified by conditional probabilities. A network of this sort can be used to repre ..."
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Cited by 484 (8 self)
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by observing pairwise dependencies among the available propositions (i.e., the leaves of the tree). The entire tree structure, including the strengths of all internal relationships, can be reconstructed in time proportional to n log n, where n is the number of leaves.
Results 1  10
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