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Surface-Based Labeling of Cortical Anatomy Using a Deformable Atlas

by Stephanie S, Richard Leahy
"... Abstract—We describe a computerized method to automatically find and label the cortical surface in three-dimensional (3-D) magnetic resonance (MR) brain images. The approach we take is to model a prelabeled brain atlas as a physical object and give it elastic properties, allowing it to warp itself o ..."
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Abstract—We describe a computerized method to automatically find and label the cortical surface in three-dimensional (3-D) magnetic resonance (MR) brain images. The approach we take is to model a prelabeled brain atlas as a physical object and give it elastic properties, allowing it to warp itself

Pipeline for the Creation of Surface-based Averaged

by Brain Atlases, Anja Kuß, Hans-christian Hege, Sabine Krofczik, Jana Borner
"... Digital atlases of the brain serve as a spatial reference frame which can be used to relate data from different image modalities and experiments. In this paper we describe a standardized pipeline for the creation of extendable surface-based anatomical insect brain atlases from 3D image data of a pop ..."
Abstract - Cited by 5 (1 self) - Add to MetaCart
Digital atlases of the brain serve as a spatial reference frame which can be used to relate data from different image modalities and experiments. In this paper we describe a standardized pipeline for the creation of extendable surface-based anatomical insect brain atlases from 3D image data of a

Recovering surface layout from an image

by Derek Hoiem, Alexei A. Efros, Martial Hebert - In IJCV , 2007
"... Humans have an amazing ability to instantly grasp the overall 3D structure of a scene – ground orientation, relative positions of major landmarks, etc – even from a single image. This ability is completely missing in most popular recognition algorithms, which pretend that the world is flat and/or vi ..."
Abstract - Cited by 205 (25 self) - Add to MetaCart
layout, a labeling of the image into geometric classes. Our main insight is to learn appearance-based models of these geometric classes, which coarsely describe the 3D scene orientation of each image region. Our multiple segmentation framework provides robust spatial support, allowing a wide variety

AUTOMATED 3D MAPPING & SHAPE ANALYSIS OF THE LATERAL VENTRICLES VIA FLUID REGISTRATION OF MULTIPLE SURFACE-BASED ATLASES

by Yi-yu Chou, Natasha Leporé, Greig I. De Zubicaray, Stephen E. Rose, Owen T. Carmichael, James T. Becker, Arthur W. Toga, Paul M. Thompson
"... We developed and validated a new method to create automated 3D parametric surface models of the lateral ventricles, designed for monitoring degenerative disease effects in clinical neuroscience studies and drug trials. First we used a set of parameterized surfaces to represent the ventricles in a ma ..."
Abstract - Cited by 3 (1 self) - Add to MetaCart
ventricular shape differences in patients. In surface-based statistical maps, we detected more widespread and intense anatomical deficits as we increased the number of atlases, and we formulated a statistical stopping criterion to determine the optimal value of N. Anterior horn anomalies in Alzheimer’s

Automatically parcellating the human cerebral cortex.

by Bruce Fischl , André Van Der Kouwe , Christophe Destrieux , Eric Halgren , Florent Ségonne , David H Salat , Evelina Busa , Larry J Seidman , Jill Goldstein , David Kennedy , Verne Caviness , Nikos Makris , Bruce Rosen , Anders M Dale , Bruce Fischl - Cereb. Cortex , 2004
"... Abstract -We present a technique for automatically assigning a neuroanatomical label to each location on a cortical surface model based on probabilistic information estimated from Introduction Techniques for labeling geometric features of the cerebral cortex are useful for analyzing a variety of fu ..."
Abstract - Cited by 189 (14 self) - Add to MetaCart
Abstract -We present a technique for automatically assigning a neuroanatomical label to each location on a cortical surface model based on probabilistic information estimated from Introduction Techniques for labeling geometric features of the cerebral cortex are useful for analyzing a variety

Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age

by Satrajit S Ghosh , Sita Kakunoori , Jean Augustinack , Alfonso Nieto-Castanon , Ioulia Kovelman , Nadine Gaab , Joanna A Christodoulou , Christina Triantafyllou , John D E Gabrieli , Bruce Fischl - NeuroImage , 2010
"... Understanding the neurophysiology of human cognitive development relies on methods that enable accurate comparison of structural and functional neuroimaging data across brains from people of different ages. A fundamental question is whether the substantial brain growth and related changes in brain ..."
Abstract - Cited by 7 (0 self) - Add to MetaCart
measures of shape similarity and volumetric-overlap of these manually labeled regions were calculated when brains were aligned using a 12-parameter affine transform, SPM's nonlinear normalization, a diffeomorphic registration (ANTS), and FreeSurfer's surface-based registration. Registration error

Disparity analysis of images

by Stephen T. Barnard, William, B. Thompson - IEEE TPAMI , 1980
"... Abstract-An algorithm for matching images of real world scenes is presented. The matching is a specification of the geometrical disparity between the images and may be used to partially reconstruct the threedimensional structure of the scene. Sets of candidate matching points are selected independen ..."
Abstract - Cited by 178 (4 self) - Add to MetaCart
selected reference image. An initial estimate of the probability of each possible disparity is made, based on the similarity of subimages surrounding the points. These estimates are iteratively improved by a relaxation labeling technique making use of the local continuity property of disparity that is a

Matching 3D Anatomical Surfaces with Non-Rigid Deformations using Octree-Splines.

by Richard Szeliski , Sttphane Lavalit - Geometric Methods in Computer Vision II,
"... Abstract This paper presents a new method for determining the minimal non-rigid deformation between two 3-D surfaces, such as those which describe anatomical structures in 3-D medical images. Although we match surfaces, we represent the deformation as a volumetric transformation. Our method perform ..."
Abstract - Cited by 156 (2 self) - Add to MetaCart
corresponds to finding the non-rigid deformation between two surfaces, with applications to model-based object recognition and deformable object tracking. In previous work [1 ], we developed a fast and accurate technique for determining the rigid transformation between two surfaces, and also between a 3-D

Labelled Dependencies in Labelled Dependencies in Machine Translation Evaluation

by Karolina Owczarzak, Josef Van Genabith, Andy Way
"... � string-based techniques compare the surface form of the translation sentence to the surface form of the reference sentence(s) � criticised for their insensitivity to perfectly legitimate syntactic and lexical variation between the translation and the reference � almost all attempts at creating bet ..."
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� string-based techniques compare the surface form of the translation sentence to the surface form of the reference sentence(s) � criticised for their insensitivity to perfectly legitimate syntactic and lexical variation between the translation and the reference � almost all attempts at creating

Refining Surface Curvature with Relaxation Labeling

by Richard Wilson And, Richard C. Wilson, Edwin R. Hancock
"... Our main contributions in this paper are twofold. In the first instance, we demonstrate how H \Gamma K surface labelling can be realised using dictionary-based probabilistic relaxation. To facilitate this implementation we have developed a dictionary of feasible surface-label configurations. Thes ..."
Abstract - Cited by 1 (0 self) - Add to MetaCart
Our main contributions in this paper are twofold. In the first instance, we demonstrate how H \Gamma K surface labelling can be realised using dictionary-based probabilistic relaxation. To facilitate this implementation we have developed a dictionary of feasible surface-label configurations
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