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Structural Alignment
, 2010
"... This article may be used for research, teaching and private study purposes. Any substantial or systematic reproduction, re-distribution, re-selling, loan or sub-licensing, systematic supply or distribution in any form to anyone is expressly forbidden. The publisher does not give any warranty express ..."
Abstract
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This article may be used for research, teaching and private study purposes. Any substantial or systematic reproduction, re-distribution, re-selling, loan or sub-licensing, systematic supply or distribution in any form to anyone is expressly forbidden. The publisher does not give any warranty express or implied or make any representation that the contents will be complete or accurate or up to date. The accuracy of any instructions, formulae and drug doses should be independently verified with primary sources. The publisher shall not be liable for any loss, actions, claims, proceedings, demand or costs or damages whatsoever or howsoever caused arising directly or indirectly in connection with or arising out of the use of this material. JOURNAL OF COGNITION AND DEVELOPMENT, 11(3):356–373 Copyright # 2010 Taylor & Francis Group, LLC ISSN: 1524-8372 print=1532-7647 online
TM-align: A protein structure alignment algorithm based on TM-score
- Nucleic Acids Research
"... TM-score ..."
PROMALS3D: a tool for multiple protein sequence and structure alignments
- Nucleic Acids Res
, 2008
"... structure alignments ..."
Structure–Structure alignment of Proteins
"... Abstract: FSSP (families of structurally similar proteins) is a database of structural alignments of proteins in the Protein Data Bank (PDB) (1). The current release has 2860 entries. The FSSP ..."
Abstract
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Abstract: FSSP (families of structurally similar proteins) is a database of structural alignments of proteins in the Protein Data Bank (PDB) (1). The current release has 2860 entries. The FSSP
Improved Statistical Alignment Models
- In Proceedings of the 38th Annual Meeting of the Association for Computational Linguistics
, 2000
"... In this paper, we present and compare various single-word based alignment models for statistical machine translation. We discuss the five IBM alignment models, the Hidden-Markov alignment model, smoothing techniques and various modifications. ..."
Abstract
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Cited by 593 (13 self)
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In this paper, we present and compare various single-word based alignment models for statistical machine translation. We discuss the five IBM alignment models, the Hidden-Markov alignment model, smoothing techniques and various modifications.
The URMS-RMS hybrid algorithm for fast and sensitive local protein structure alignment
- Journal of Computational Biology
, 2005
"... structure alignment ..."
SCOP, Structural Classification of Proteins Database: Applications to Evaluation of the Effectiveness of Sequence Alignment Methods and Statistics of Protein Structural Data
, 1998
"... The Structural Classification of Proteins (SCOP) database provides a detailed and comprehensive description of the relationships of all known protein structures. The classification is on hierarchical levels: the first two levels, family and superfamily, describe near and far evolutionary relationshi ..."
Abstract
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Cited by 1541 (24 self)
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The Structural Classification of Proteins (SCOP) database provides a detailed and comprehensive description of the relationships of all known protein structures. The classification is on hierarchical levels: the first two levels, family and superfamily, describe near and far evolutionary
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