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34,299
Algorithmic mechanism design
 Games and Economic Behavior
, 1999
"... We consider algorithmic problems in a distributed setting where the participants cannot be assumed to follow the algorithm but rather their own selfinterest. As such participants, termed agents, are capable of manipulating the algorithm, the algorithm designer should ensure in advance that the agen ..."
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Cited by 662 (23 self)
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that the agents ’ interests are best served by behaving correctly. Following notions from the field of mechanism design, we suggest a framework for studying such algorithms. Our main technical contribution concerns the study of a representative task scheduling problem for which the standard mechanism design tools
The algorithmic analysis of hybrid systems
 THEORETICAL COMPUTER SCIENCE
, 1995
"... We present a general framework for the formal specification and algorithmic analysis of hybrid systems. A hybrid system consists of a discrete program with an analog environment. We model hybrid systems as nite automata equipped with variables that evolve continuously with time according to dynamica ..."
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Cited by 778 (71 self)
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We present a general framework for the formal specification and algorithmic analysis of hybrid systems. A hybrid system consists of a discrete program with an analog environment. We model hybrid systems as nite automata equipped with variables that evolve continuously with time according
Fast probabilistic algorithms for verification of polynomial identities
 J. ACM
, 1980
"... ABSTRACT The starthng success of the RabmStrassenSolovay pnmahty algorithm, together with the intriguing foundattonal posstbthty that axtoms of randomness may constttute a useful fundamental source of mathemaucal truth independent of the standard axmmaUc structure of mathemaUcs, suggests a wgorous ..."
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Cited by 520 (1 self)
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ABSTRACT The starthng success of the RabmStrassenSolovay pnmahty algorithm, together with the intriguing foundattonal posstbthty that axtoms of randomness may constttute a useful fundamental source of mathemaucal truth independent of the standard axmmaUc structure of mathemaUcs, suggests a
Fast Parallel Algorithms for ShortRange Molecular Dynamics
 JOURNAL OF COMPUTATIONAL PHYSICS
, 1995
"... Three parallel algorithms for classical molecular dynamics are presented. The first assigns each processor a fixed subset of atoms; the second assigns each a fixed subset of interatomic forces to compute; the third assigns each a fixed spatial region. The algorithms are suitable for molecular dyn ..."
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Cited by 653 (7 self)
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. The algorithms are tested on a standard LennardJones benchmark problem for system sizes ranging from 500 to 100,000,000 atoms on several parallel supercomputers  the nCUBE 2, Intel iPSC/860 and Paragon, and Cray T3D. Comparing the results to the fastest reported vectorized Cray YMP and C90 algorithm shows
Fibonacci Heaps and Their Uses in Improved Network optimization algorithms
, 1987
"... In this paper we develop a new data structure for implementing heaps (priority queues). Our structure, Fibonacci heaps (abbreviated Fheaps), extends the binomial queues proposed by Vuillemin and studied further by Brown. Fheaps support arbitrary deletion from an nitem heap in qlogn) amortized tim ..."
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Cited by 739 (18 self)
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time and all other standard heap operations in o ( 1) amortized time. Using Fheaps we are able to obtain improved running times for several network optimization algorithms. In particular, we obtain the following worstcase bounds, where n is the number of vertices and m the number of edges
LSQR: An Algorithm for Sparse Linear Equations and Sparse Least Squares
 ACM Trans. Math. Software
, 1982
"... An iterative method is given for solving Ax ~ffi b and minU Ax b 112, where the matrix A is large and sparse. The method is based on the bidiagonalization procedure of Golub and Kahan. It is analytically equivalent to the standard method of conjugate gradients, but possesses more favorable numerica ..."
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Cited by 653 (21 self)
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An iterative method is given for solving Ax ~ffi b and minU Ax b 112, where the matrix A is large and sparse. The method is based on the bidiagonalization procedure of Golub and Kahan. It is analytically equivalent to the standard method of conjugate gradients, but possesses more favorable
The use of the area under the ROC curve in the evaluation of machine learning algorithms
 PATTERN RECOGNITION
, 1997
"... In this paper we investigate the use of the area under the receiver operating characteristic (ROC) curve (AUC) as a performance measure for machine learning algorithms. As a case study we evaluate six machine learning algorithms (C4.5, Multiscale Classifier, Perceptron, Multilayer Perceptron, kNe ..."
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Cited by 685 (3 self)
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In this paper we investigate the use of the area under the receiver operating characteristic (ROC) curve (AUC) as a performance measure for machine learning algorithms. As a case study we evaluate six machine learning algorithms (C4.5, Multiscale Classifier, Perceptron, Multilayer Perceptron, k
The NewReno Modification to TCP’s Fast Recovery Algorithm
, 2003
"... RFC 2581 [RFC2581] documents the following four intertwined TCP congestion control algorithms: Slow Start, Congestion Avoidance, Fast Retransmit, and Fast Recovery. RFC 2581 [RFC2581] explicitly allows certain modifications of these algorithms, including modifications that use the TCP Selective Ackn ..."
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Cited by 600 (9 self)
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to Proposed Standard. RFC 2581 notes that the Fast Retransmit/Fast Recovery algorithm specified in that document does not recover very efficiently from multiple losses in a single flight of packets, and that RFC 2582 contains one set of modifications to address this problem.
A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood
, 2003
"... The increase in the number of large data sets and the complexity of current probabilistic sequence evolution models necessitates fast and reliable phylogeny reconstruction methods. We describe a new approach, based on the maximumlikelihood principle, which clearly satisfies these requirements. The ..."
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Cited by 2182 (27 self)
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. The core of this method is a simple hillclimbing algorithm that adjusts tree topology and branch lengths simultaneously. This algorithm starts from an initial tree built by a fast distancebased method and modifies this tree to improve its likelihood at each iteration. Due to this simultaneous adjustment
Biclustering algorithms for biological data analysis: a survey.
 IEEE/ACM Transactions of Computational Biology and Bioinformatics,
, 2004
"... Abstract A large number of clustering approaches have been proposed for the analysis of gene expression data obtained from microarray experiments. However, the results of the application of standard clustering methods to genes are limited. These limited results are imposed by the existence of a num ..."
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Cited by 481 (15 self)
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Abstract A large number of clustering approaches have been proposed for the analysis of gene expression data obtained from microarray experiments. However, the results of the application of standard clustering methods to genes are limited. These limited results are imposed by the existence of a
Results 1  10
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34,299