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Results 11 - 20
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2,077,767
Multiple sequence alignment with the Clustal series of programs
- Nucleic Acids Res
, 2003
"... The Clustal series of programs are widely used in molecular biology for the multiple alignment of both nucleic acid and protein sequences and for preparing phylogenetic trees. The popularity of the programs depends on a number of factors, including not only the accuracy of the results, but also the ..."
Abstract
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Cited by 725 (5 self)
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the robustness, portability and user-friendliness of the programs. New features include NEXUS and FASTA format output, printing range numbers and faster tree calculation. Although, Clustal was originally developed to run on a local computer, numerous Web servers have been set up, notably at the EBI
Systematic design of program analysis frameworks
- In 6th POPL
, 1979
"... Semantic analysis of programs is essential in optimizing compilers and program verification systems. It encompasses data flow analysis, data type determination, generation of approximate invariant ..."
Abstract
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Cited by 771 (52 self)
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Semantic analysis of programs is essential in optimizing compilers and program verification systems. It encompasses data flow analysis, data type determination, generation of approximate invariant
Minimax Programs
- University of California Press
, 1997
"... We introduce an optimization problem called a minimax program that is similar to a linear program, except that the addition operator is replaced in the constraint equations by the maximum operator. We clarify the relation of this problem to some better-known problems. We identify an interesting spec ..."
Abstract
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Cited by 475 (5 self)
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We introduce an optimization problem called a minimax program that is similar to a linear program, except that the addition operator is replaced in the constraint equations by the maximum operator. We clarify the relation of this problem to some better-known problems. We identify an interesting
Classical negation in logic programs and disjunctive databases
- New Generation Computing
, 1991
"... An important limitation of traditional logic programming as a knowledge representation tool, in comparison with classical logic, is that logic programming does not allow us to deal directly with incomplete information. In order to overcome this limitation, we extend the class of general logic progra ..."
Abstract
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Cited by 1050 (76 self)
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An important limitation of traditional logic programming as a knowledge representation tool, in comparison with classical logic, is that logic programming does not allow us to deal directly with incomplete information. In order to overcome this limitation, we extend the class of general logic
A Transformation System for Developing Recursive Programs
, 1977
"... A system of rules for transforming programs is described, with the programs in the form of recursion equations An initially very simple, lucid. and hopefully correct program IS transformed into a more efficient one by altering the recursion structure Illustrative examples of program transformations ..."
Abstract
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Cited by 653 (3 self)
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A system of rules for transforming programs is described, with the programs in the form of recursion equations An initially very simple, lucid. and hopefully correct program IS transformed into a more efficient one by altering the recursion structure Illustrative examples of program transformations
The program dependence graph and its use in optimization
- ACM Transactions on Programming Languages and Systems
, 1987
"... In this paper we present an intermediate program representation, called the program dependence graph (PDG), that makes explicit both the data and control dependence5 for each operation in a program. Data dependences have been used to represent only the relevant data flow relationships of a program. ..."
Abstract
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Cited by 989 (3 self)
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In this paper we present an intermediate program representation, called the program dependence graph (PDG), that makes explicit both the data and control dependence5 for each operation in a program. Data dependences have been used to represent only the relevant data flow relationships of a program
Learning the Kernel Matrix with Semi-Definite Programming
, 2002
"... Kernel-based learning algorithms work by embedding the data into a Euclidean space, and then searching for linear relations among the embedded data points. The embedding is performed implicitly, by specifying the inner products between each pair of points in the embedding space. This information ..."
Abstract
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Cited by 780 (22 self)
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problems in machine learning. In this paper we show how the kernel matrix can be learned from data via semi-definite programming (SDP) techniques. When applied
The SPLASH-2 programs: Characterization and methodological considerations
- INTERNATIONAL SYMPOSIUM ON COMPUTER ARCHITECTURE
, 1995
"... The SPLASH-2 suite of parallel applications has recently been released to facilitate the study of centralized and distributed shared-address-space multiprocessors. In this context, this paper has two goals. One is to quantitatively characterize the SPLASH-2 programs in terms of fundamental propertie ..."
Abstract
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Cited by 1399 (12 self)
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The SPLASH-2 suite of parallel applications has recently been released to facilitate the study of centralized and distributed shared-address-space multiprocessors. In this context, this paper has two goals. One is to quantitatively characterize the SPLASH-2 programs in terms of fundamental
Results 11 - 20
of
2,077,767
