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397,162
Exploiting Causal Independence in Bayesian Network Inference
 Journal of Artificial Intelligence Research
, 1996
"... A new method is proposed for exploiting causal independencies in exact Bayesian network inference. ..."
Abstract

Cited by 181 (10 self)
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A new method is proposed for exploiting causal independencies in exact Bayesian network inference.
Genetic Network Inference: From CoExpression Clustering To Reverse Engineering
, 2000
"... motivation: Advances in molecular biological, analytical and computational technologies are enabling us to systematically investigate the complex molecular processes underlying biological systems. In particular, using highthroughput gene expression assays, we are able to measure the output of the ge ..."
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Cited by 336 (0 self)
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of the gene regulatory network. We aim here to review datamining and modeling approaches for conceptualizing and unraveling the functional relationships implicit in these datasets. Clustering of coexpression profiles allows us to infer shared regulatory inputs and functional pathways. We discuss various
Dynamic Bayesian Networks: Representation, Inference and Learning
, 2002
"... Modelling sequential data is important in many areas of science and engineering. Hidden Markov models (HMMs) and Kalman filter models (KFMs) are popular for this because they are simple and flexible. For example, HMMs have been used for speech recognition and biosequence analysis, and KFMs have bee ..."
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Cited by 768 (3 self)
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been used for problems ranging from tracking planes and missiles to predicting the economy. However, HMMs
and KFMs are limited in their “expressive power”. Dynamic Bayesian Networks (DBNs) generalize HMMs by allowing the state space to be represented in factored form, instead of as a single discrete
Searching Distributed Collections With Inference Networks
 IN PROCEEDINGS OF THE 18TH ANNUAL INTERNATIONAL ACM SIGIR CONFERENCE ON RESEARCH AND DEVELOPMENT IN INFORMATION RETRIEVAL
, 1995
"... The use of information retrieval systems in networked environments raises a new set of issues that have received little attention. These issues include ranking document collections for relevance to a query, selecting the best set of collections from a ranked list, and merging the document rankings t ..."
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Cited by 475 (36 self)
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that are returned from a set of collections. This paper describes methods of addressing each issue in the inference network model, discusses their implementation in the INQUERY system, and presents experimental results demonstrating their effectiveness.
Loopy belief propagation for approximate inference: An empirical study. In:
 Proceedings of Uncertainty in AI,
, 1999
"... Abstract Recently, researchers have demonstrated that "loopy belief propagation" the use of Pearl's polytree algorithm in a Bayesian network with loops can perform well in the context of errorcorrecting codes. The most dramatic instance of this is the near Shannonlimit performanc ..."
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Cited by 674 (15 self)
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limit performance of "Turbo Codes" codes whose decoding algorithm is equivalent to loopy belief propagation in a chainstructured Bayesian network. In this paper we ask: is there something spe cial about the errorcorrecting code context, or does loopy propagation work as an ap proximate inference scheme
Probabilistic Inference Using Markov Chain Monte Carlo Methods
, 1993
"... Probabilistic inference is an attractive approach to uncertain reasoning and empirical learning in artificial intelligence. Computational difficulties arise, however, because probabilistic models with the necessary realism and flexibility lead to complex distributions over highdimensional spaces. R ..."
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Cited by 735 (24 self)
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Probabilistic inference is an attractive approach to uncertain reasoning and empirical learning in artificial intelligence. Computational difficulties arise, however, because probabilistic models with the necessary realism and flexibility lead to complex distributions over highdimensional spaces
Trace Complexity of Network Inference
, 2013
"... The network inference problem consists of reconstructing the edge set of a network given traces representing the chronology of infection times as epidemics spread through the network. This problem is a paradigmatic representative of prediction tasks in machine learning that require deducing a latent ..."
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Cited by 5 (1 self)
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The network inference problem consists of reconstructing the edge set of a network given traces representing the chronology of infection times as epidemics spread through the network. This problem is a paradigmatic representative of prediction tasks in machine learning that require deducing a
Markov Logic Networks
 MACHINE LEARNING
, 2006
"... We propose a simple approach to combining firstorder logic and probabilistic graphical models in a single representation. A Markov logic network (MLN) is a firstorder knowledge base with a weight attached to each formula (or clause). Together with a set of constants representing objects in the ..."
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Cited by 816 (39 self)
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in the domain, it specifies a ground Markov network containing one feature for each possible grounding of a firstorder formula in the KB, with the corresponding weight. Inference in MLNs is performed by MCMC over the minimal subset of the ground network required for answering the query. Weights are efficiently
The linkprediction problem for social networks
 J. AMERICAN SOCIETY FOR INFORMATION SCIENCE AND TECHNOLOGY
, 2007
"... Given a snapshot of a social network, can we infer which new interactions among its members are likely to occur in the near future? We formalize this question as the linkprediction problem, and we develop approaches to link prediction based on measures for analyzing the “proximity” of nodes in a ne ..."
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Cited by 903 (6 self)
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Given a snapshot of a social network, can we infer which new interactions among its members are likely to occur in the near future? We formalize this question as the linkprediction problem, and we develop approaches to link prediction based on measures for analyzing the “proximity” of nodes in a
Application of Phylogenetic Networks in Evolutionary Studies
 SUBMITTED TO MBE 2005
, 2005
"... The evolutionary history of a set of taxa is usually represented by a phylogenetic tree, and this model has greatly facilitated the discussion and testing of hypotheses. However, it is well known that more complex evolutionary scenarios are poorly described by such models. Further, even when evoluti ..."
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Cited by 887 (15 self)
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a conservative statistical test for whether the conflicting signal in a network is treelike. Finally, this paper describes a new program SplitsTree4, an interactive and comprehensive tool for inferring different types of phylogenetic networks from sequences, distances and trees.
Results 1  10
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