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16,014
A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood
, 2003
"... The increase in the number of large data sets and the complexity of current probabilistic sequence evolution models necessitates fast and reliable phylogeny reconstruction methods. We describe a new approach, based on the maximumlikelihood principle, which clearly satisfies these requirements. The ..."
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Cited by 2182 (27 self)
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of distancebased and parsimony approaches. The reduction of computing time is dramatic in comparison with other maximumlikelihood packages, while the likelihood maximization ability tends to be higher. For example, only 12 min were required on a standard personal computer to analyze a data set consisting
Answering the Skeptics: Yes, Standard Volatility Models Do Provide Accurate Forecasts
"... Volatility permeates modern financial theories and decision making processes. As such, accurate measures and good forecasts of future volatility are critical for the implementation and evaluation of asset and derivative pricing theories as well as trading and hedging strategies. In response to this, ..."
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Cited by 561 (45 self)
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volatility persistence. Meanwhile, when judged by standard forecast evaluation criteria, based on the squared or absolute returns over daily or longer forecast horizons, standard volatility models provide seemingly poor forecasts. The present paper demonstrates that, contrary to this contention
Analysis of relative gene expression data using realtime quantitative
 PCR and 2 ���CT method. Methods 25
, 2001
"... of the target gene relative to some reference group The two most commonly used methods to analyze data from realtime, quantitative PCR experiments are absolute quantificasuch as an untreated control or a sample at time zero tion and relative quantification. Absolute quantification deter in a time ..."
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Cited by 2666 (6 self)
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timecourse study. mines the input copy number, usually by relating the PCR signal Absolute quantification should be performed in situto a standard curve. Relative quantification relates the PCR signal ations where it is necessary to determine the absolute of the target transcript in a treatment group
Probabilistic Outputs for Support Vector Machines and Comparisons to Regularized Likelihood Methods
 ADVANCES IN LARGE MARGIN CLASSIFIERS
, 1999
"... The output of a classifier should be a calibrated posterior probability to enable postprocessing. Standard SVMs do not provide such probabilities. One method to create probabilities is to directly train a kernel classifier with a logit link function and a regularized maximum likelihood score. Howev ..."
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Cited by 1051 (0 self)
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The output of a classifier should be a calibrated posterior probability to enable postprocessing. Standard SVMs do not provide such probabilities. One method to create probabilities is to directly train a kernel classifier with a logit link function and a regularized maximum likelihood score
Quantal Response Equilibria For Normal Form Games
 NORMAL FORM GAMES, GAMES AND ECONOMIC BEHAVIOR
, 1995
"... We investigate the use of standard statistical models for quantal choice in a game theoretic setting. Players choose strategies based on relative expected utility, and assume other players do so as well. We define a Quantal Response Equilibrium (QRE) as a fixed point of this process, and establish e ..."
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Cited by 647 (28 self)
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We investigate the use of standard statistical models for quantal choice in a game theoretic setting. Players choose strategies based on relative expected utility, and assume other players do so as well. We define a Quantal Response Equilibrium (QRE) as a fixed point of this process, and establish
Thumbs up? Sentiment Classification using Machine Learning Techniques
 IN PROCEEDINGS OF EMNLP
, 2002
"... We consider the problem of classifying documents not by topic, but by overall sentiment, e.g., determining whether a review is positive or negative. Using movie reviews as data, we find that standard machine learning techniques definitively outperform humanproduced baselines. However, the three mac ..."
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Cited by 1101 (7 self)
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We consider the problem of classifying documents not by topic, but by overall sentiment, e.g., determining whether a review is positive or negative. Using movie reviews as data, we find that standard machine learning techniques definitively outperform humanproduced baselines. However, the three
Energy Conserving Routing in Wireless Adhoc Networks
, 2000
"... An adhoc network of wireless static nodes is considered as it arises in a rapidly deployed, sensor based, monitoring system. Information is generated in certain nodes and needs to reach a set of designated gateway nodes. Each node may adjust its power within a certain range that determines the set ..."
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Cited by 622 (2 self)
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propose algorithms to select the routes and the corresponding power levels such that the time until the batteries of the nodes drainout is maximized. The algorithms are local and amenable to distributed implementation. When there is a single power level, the problem is reduced to a maximum flow problem
Gradient projection for sparse reconstruction: Application to compressed sensing and other inverse problems
 IEEE JOURNAL OF SELECTED TOPICS IN SIGNAL PROCESSING
, 2007
"... Many problems in signal processing and statistical inference involve finding sparse solutions to underdetermined, or illconditioned, linear systems of equations. A standard approach consists in minimizing an objective function which includes a quadratic (squared ℓ2) error term combined with a spa ..."
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Cited by 539 (17 self)
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Many problems in signal processing and statistical inference involve finding sparse solutions to underdetermined, or illconditioned, linear systems of equations. A standard approach consists in minimizing an objective function which includes a quadratic (squared ℓ2) error term combined with a
Shallow Parsing with Conditional Random Fields
, 2003
"... Conditional random fields for sequence labeling offer advantages over both generative models like HMMs and classifiers applied at each sequence position. Among sequence labeling tasks in language processing, shallow parsing has received much attention, with the development of standard evaluati ..."
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Cited by 581 (8 self)
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Conditional random fields for sequence labeling offer advantages over both generative models like HMMs and classifiers applied at each sequence position. Among sequence labeling tasks in language processing, shallow parsing has received much attention, with the development of standard
Probabilistic Latent Semantic Analysis
 In Proc. of Uncertainty in Artificial Intelligence, UAI’99
, 1999
"... Probabilistic Latent Semantic Analysis is a novel statistical technique for the analysis of twomode and cooccurrence data, which has applications in information retrieval and filtering, natural language processing, machine learning from text, and in related areas. Compared to standard Latent Sema ..."
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Cited by 771 (9 self)
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Probabilistic Latent Semantic Analysis is a novel statistical technique for the analysis of twomode and cooccurrence data, which has applications in information retrieval and filtering, natural language processing, machine learning from text, and in related areas. Compared to standard Latent
Results 1  10
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16,014