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Dynamic topic models

by David M. Blei, John D. Lafferty - In ICML , 2006
"... Scientists need new tools to explore and browse large collections of scholarly literature. Thanks to organizations such as JSTOR, which scan and index the original bound archives of many journals, modern scientists can search digital libraries spanning hundreds of years. A scientist, suddenly ..."
Abstract - Cited by 681 (29 self) - Add to MetaCart
Scientists need new tools to explore and browse large collections of scholarly literature. Thanks to organizations such as JSTOR, which scan and index the original bound archives of many journals, modern scientists can search digital libraries spanning hundreds of years. A scientist, suddenly

Community detection in graphs

by Santo Fortunato , 2009
"... The modern science of networks has brought significant advances to our understanding of complex systems. One of the most relevant features of graphs representing real systems is community structure, or clustering, i. e. the organization of vertices in clusters, with many edges joining vertices of th ..."
Abstract - Cited by 821 (1 self) - Add to MetaCart
The modern science of networks has brought significant advances to our understanding of complex systems. One of the most relevant features of graphs representing real systems is community structure, or clustering, i. e. the organization of vertices in clusters, with many edges joining vertices

The complete genome sequence of Escherichia coli K-12

by Frederick R. Blattner, Guy Plunkett Iii, Craig A. Bloch, Nicole T. Perna, Valerie Burl, Monica Riley, Julio Collado-vides, Jeremy D. Glasner, Christopher K. Rode, George F. Mayhew, Jason Gregor, Nelson Wayne Davis, Heather A. Kirkpatrick, Michael A. Goeden, Debra J. Rose, Bob Mau, Ying Shao - Science , 1997
"... The 4,639,221–base pair sequence of Escherichia coli K-12 is presented. Of 4288 protein-coding genes annotated, 38 percent have no attributed function. Comparison with five other sequenced microbes reveals ubiquitous as well as narrowly distributed gene families; many families of similar genes withi ..."
Abstract - Cited by 1129 (39 self) - Add to MetaCart
The 4,639,221–base pair sequence of Escherichia coli K-12 is presented. Of 4288 protein-coding genes annotated, 38 percent have no attributed function. Comparison with five other sequenced microbes reveals ubiquitous as well as narrowly distributed gene families; many families of similar genes

Simultaneous Multithreading: Maximizing On-Chip Parallelism

by Dean M. Tullsen , Susan J. Eggers, Henry M. Levy , 1995
"... This paper examines simultaneous multithreading, a technique permitting several independent threads to issue instructions to a superscalar’s multiple functional units in a single cycle. We present several models of simultaneous multithreading and compare them with alternative organizations: a wide s ..."
Abstract - Cited by 823 (48 self) - Add to MetaCart
, it can add substantial complexity to the design. We examine many of these complexities and evaluate alternative organizations in the design space.

Modeling and simulation of genetic regulatory systems: A literature review

by Hidde De Jong - JOURNAL OF COMPUTATIONAL BIOLOGY , 2002
"... In order to understand the functioning of organisms on the molecular level, we need to know which genes are expressed, when and where in the organism, and to which extent. The regulation of gene expression is achieved through genetic regulatory systems structured by networks of interactions between ..."
Abstract - Cited by 738 (14 self) - Add to MetaCart
In order to understand the functioning of organisms on the molecular level, we need to know which genes are expressed, when and where in the organism, and to which extent. The regulation of gene expression is achieved through genetic regulatory systems structured by networks of interactions between

Epidemic Spreading in Scale-Free Networks

by Romualdo Pastor-satorras, Alessandro Vespignani , 2000
"... The Internet, as well as many other networks, has a very complex connectivity recently modeled by the class of scale-free networks. This feature, which appears to be very efficient for a communications network, favors at the same time the spreading of computer viruses. We analyze real data from c ..."
Abstract - Cited by 575 (15 self) - Add to MetaCart
The Internet, as well as many other networks, has a very complex connectivity recently modeled by the class of scale-free networks. This feature, which appears to be very efficient for a communications network, favors at the same time the spreading of computer viruses. We analyze real data from

Knowledge-based Analysis of Microarray Gene Expression Data By Using Support Vector Machines

by Michael P. S. Brown, William Noble Grundy, David Lin, Nello Cristianini, Charles Walsh Sugnet, Terrence S. Furey, Manuel Ares, Jr., David Haussler , 2000
"... We introduce a method of functionally classifying genes by using gene expression data from DNA microarray hybridization experiments. The method is based on the theory of support vector machines (SVMs). SVMs are considered a supervised computer learning method because they exploit prior knowledge of ..."
Abstract - Cited by 520 (8 self) - Add to MetaCart
of gene function to identify unknown genes of similar function from expression data. SVMs avoid several problems associated with unsupervised clustering methods, such as hierarchical clustering and self-organizing maps. SVMs have many mathematical features that make them attractive for gene expression

Inductive learning algorithms and representations for text categorization,”

by Susan Dumais , John Platt , Mehran Sahami , David Heckerman - in Proceedings of the International Conference on Information and Knowledge Management, , 1998
"... ABSTRACT Text categorization -the assignment of natural language texts to one or more predefined categories based on their content -is an important component in many information organization and management tasks. We compare the effectiveness of five different automatic learning algorithms for text ..."
Abstract - Cited by 652 (8 self) - Add to MetaCart
ABSTRACT Text categorization -the assignment of natural language texts to one or more predefined categories based on their content -is an important component in many information organization and management tasks. We compare the effectiveness of five different automatic learning algorithms for text

The Amoeba Distributed Operating System

by Andrew S. Tanenbaum, Gregory J. Sharp, De Boelelaan A , 1992
"... INTRODUCTION Roughly speaking, we can divide the history of modern computing into the following eras: d 1970s: Timesharing (1 computer with many users) d 1980s: Personal computing (1 computer per user) d 1990s: Parallel computing (many computers per user) Until about 1980, computers were huge, e ..."
Abstract - Cited by 1069 (5 self) - Add to MetaCart
INTRODUCTION Roughly speaking, we can divide the history of modern computing into the following eras: d 1970s: Timesharing (1 computer with many users) d 1980s: Personal computing (1 computer per user) d 1990s: Parallel computing (many computers per user) Until about 1980, computers were huge

USER ACCEPTANCE OF INFORMATION TECHNOLOGY: TOWARD A UNIFIED VIEW

by Viswanath Venkatesh, Michael G. Morris, Gordon B. Davis, Fred D. Davis , 2003
"... Information technology (IT) acceptance research has yielded many competing models, each with different sets of acceptance determinants. In this paper, we (1) review user acceptance literature and discuss eight prominent models, (2) empirically compare the eight models and their extensions, (3) formu ..."
Abstract - Cited by 1807 (10 self) - Add to MetaCart
Information technology (IT) acceptance research has yielded many competing models, each with different sets of acceptance determinants. In this paper, we (1) review user acceptance literature and discuss eight prominent models, (2) empirically compare the eight models and their extensions, (3
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