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A bivalent chromatin structure marks key developmental genes in embryonic stem cells, Cell 125

by Bradley E. Bernstein, Tarjei S. Mikkelsen, Xiaohui Xie, Michael Kamal, Dana J. Huebert, James Cuff, Ben Fry, Alex Meissner, Marius Wernig, Kathrin Plath, Rudolf Jaenisch, Re Wagschal, Robert Feil, Stuart L. Schreiber, Eric S. L , 2006
"... The most highly conserved noncoding elements (HCNEs) in mammalian genomes cluster within regions enriched for genes encoding developmentally important transcription factors (TFs). This suggests that HCNE-rich regions may contain key regulatory controls involved in development. We explored this by ex ..."
Abstract - Cited by 269 (2 self) - Add to MetaCart
The most highly conserved noncoding elements (HCNEs) in mammalian genomes cluster within regions enriched for genes encoding developmentally important transcription factors (TFs). This suggests that HCNE-rich regions may contain key regulatory controls involved in development. We explored

CIS-REGULATORY ANALYSIS OF THE KEY DEVELOPMENTAL GENE, SOX10, IN NEURAL CREST AND EAR

by Paola Betancur, Paola Betancur , 2010
"... I would like to first thank my advisors, Marianne Bronner-Fraser and Tatjana Sauka-Spengler for giving me the opportunity to study the sox10 gene. Thanks for their support, advice and understanding. Dr. Sauka-Spengler’s daily guidance and broad scientific knowledge kept me on track time after time. ..."
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I would like to first thank my advisors, Marianne Bronner-Fraser and Tatjana Sauka-Spengler for giving me the opportunity to study the sox10 gene. Thanks for their support, advice and understanding. Dr. Sauka-Spengler’s daily guidance and broad scientific knowledge kept me on track time after time

Article Ciona intestinalis as a Marine Model System to Study Some Key Developmental Genes Targeted by the Diatom-Derived

by Aldehyde Decadienal, Anna Lettieri, Rosaria Esposito, Adrianna Ianora, Antonietta Spagnuolo , 2015
"... marine drugs ..."
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marine drugs

The transcriptional program of sporulation in budding yeast

by S. Chu, J. DeRisi, M. Eisen, J. Mulholland, D. Botstein, P. O. Brown, I. Herskowitz - SCIENCE , 1998
"... Diploid cells of budding yeast produce haploid cells through the develop-mental program of sporulation, which consists of meiosis and spore morphogenesis. DNA microarrays containing nearly every yeast gene were used to assay changes in gene expression during sporulation. At least seven distinct temp ..."
Abstract - Cited by 497 (8 self) - Add to MetaCart
Diploid cells of budding yeast produce haploid cells through the develop-mental program of sporulation, which consists of meiosis and spore morphogenesis. DNA microarrays containing nearly every yeast gene were used to assay changes in gene expression during sporulation. At least seven distinct

Using Bayesian networks to analyze expression data

by Nir Friedman, Michal Linial, Iftach Nachman - Journal of Computational Biology , 2000
"... DNA hybridization arrays simultaneously measure the expression level for thousands of genes. These measurements provide a “snapshot ” of transcription levels within the cell. A major challenge in computational biology is to uncover, from such measurements, gene/protein interactions and key biologica ..."
Abstract - Cited by 1088 (17 self) - Add to MetaCart
DNA hybridization arrays simultaneously measure the expression level for thousands of genes. These measurements provide a “snapshot ” of transcription levels within the cell. A major challenge in computational biology is to uncover, from such measurements, gene/protein interactions and key

Identification of programmed cell death in situ via specific labeling of nuclear DNA fragmentation

by Yael Gavrieli, Yoav Sherman, Shmuel A. Ben-sasson - J. Cell , 1992
"... Abstract. Programmed cell death (PCD) plays a key role in developmental biology and in maintenance of the steady state in continuously renewing tissues. Currently, its existence is inferred mainly from gel electrophoresis of a pooled DNA extract as PCD was shown to be associated with DNA fragmentati ..."
Abstract - Cited by 691 (0 self) - Add to MetaCart
Abstract. Programmed cell death (PCD) plays a key role in developmental biology and in maintenance of the steady state in continuously renewing tissues. Currently, its existence is inferred mainly from gel electrophoresis of a pooled DNA extract as PCD was shown to be associated with DNA

Rho GTPases and the actin cytoskeleton

by Alan Hall - Science , 1998
"... The actin cytoskeleton mediates a variety of essential biological functions in all eukaryotic cells. In addition to providing a structural framework around which cell shape and polarity are defined, its dynamic properties provide the driving force for cells to move and to divide. Understanding the b ..."
Abstract - Cited by 615 (4 self) - Add to MetaCart
the biochemical mechanisms that control the organization of actin is thus a major goal of contemporary cell biology, with implications for health and disease. Members of the Rho family of small guanosine triphosphatases have emerged as key regulators of the actin cytoskeleton, and furthermore, through

Clustering Gene Expression Patterns

by Amir Ben-Dor, Ron Shamir, Zohar Yakhini , 1999
"... Recent advances in biotechnology allow researchers to measure expression levels for thousands of genes simultaneously, across different conditions and over time. Analysis of data produced by such experiments offers potential insight into gene function and regulatory mechanisms. A key step in the ana ..."
Abstract - Cited by 451 (11 self) - Add to MetaCart
Recent advances in biotechnology allow researchers to measure expression levels for thousands of genes simultaneously, across different conditions and over time. Analysis of data produced by such experiments offers potential insight into gene function and regulatory mechanisms. A key step

The faculty of language: what is it, who has it, and how did it evolve?

by Marc D Hauser , Noam Chomsky , W Tecumseh Fitch - Science, , 2002
"... We argue that an understanding of the faculty of language requires substantial interdisciplinary cooperation. We suggest how current developments in linguistics can be profitably wedded to work in evolutionary biology, anthropology, psychology, and neuroscience. We submit that a distinction should ..."
Abstract - Cited by 472 (7 self) - Add to MetaCart
conserved developmental systems that read an (almost) universal language encoded in DNA base pairs. As such, life is arranged hierarchically with a foundation of discrete, unblendable units (codons, and, for the most part, genes) capable of combining to create increasingly complex and virtually limitless

Mosaic analysis with a repressible cell marker for studies of gene function in neuronal morphogenesis.

by Tzumin Lee , Liqun Luo - Neuron , 1999
"... We have modified an FLP/FRT-based genetic mosaic system to label either neurons derived from a common progenitor or isolated single neurons, in the Drosophila CNS. These uniquely labeled neurons can also be made homozygous for a mutation of interest within an otherwise phenotypically wild-type brai ..."
Abstract - Cited by 455 (22 self) - Add to MetaCart
-type brain. Using this new mosaic system, not only can normal brain development be described with unprecedented single cell resolution, but also the underlying molecular mechanisms can be investigated by identifying genes that are required for these developmental processes. Since Ramon y Cajal and his
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