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17,268
Marchini J: A flexible and accurate genotype imputation method for the next generation of genome-wide association studies. PLoS Genet 2009
"... Genotype imputation methods are now being widely used in the analysis of genome-wide association studies. Most imputation analyses to date have used the HapMap as a reference dataset, but new reference panels (such as controls genotyped on multiple SNP chips and densely typed samples from the 1,000 ..."
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Cited by 449 (5 self)
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the improvements that can be made. We also find that imputation accuracy can be greatly enhanced by expanding the reference panel to contain thousands of chromosomes and that IMPUTE v2 outperforms other methods in this setting at both rare and common SNPs, with overall error rates that are 15%–20 % lower than
Base-calling of automated sequencer traces using phred. I. Accuracy Assessment
- GENOME RES
, 1998
"... The availability of massive amounts of DNA sequence information has begun to revolutionize the practice of biology. As a result, current large-scale sequencing output, while impressive, is not adequate to keep pace with growing demand and, in particular, is far short of what will be required to obta ..."
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Cited by 1653 (4 self)
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accuracy. phred appears to be the first base-calling program to achieve a lower error rate than the ABI software, averaging 40%–50 % fewer errors in the data sets examined independent of position in read, machine running conditions, or sequencing chemistry.
A direct approach to false discovery rates
, 2002
"... Summary. Multiple-hypothesis testing involves guarding against much more complicated errors than single-hypothesis testing. Whereas we typically control the type I error rate for a single-hypothesis test, a compound error rate is controlled for multiple-hypothesis tests. For example, controlling the ..."
Abstract
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Cited by 775 (14 self)
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and then estimate its corresponding error rate. This new approach offers increased applicability, accuracy and power. We apply the methodology to both the positive false discovery rate pFDR and FDR, and provide evidence for its benefits. It is shown that pFDR is probably the quantity of interest over FDR. Also
Empirical exchange rate models of the Seventies: do they fit out of sample?
- JOURNAL OF INTERNATIONAL ECONOMICS
, 1983
"... This study compares the out-of-sample forecasting accuracy of various structural and time series exchange rate models. We find that a random walk model performs as well as any estimated model at one to twelve month horizons for the dollar/pound, dollar/mark, dollar/yen and trade-weighted dollar exch ..."
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Cited by 854 (12 self)
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This study compares the out-of-sample forecasting accuracy of various structural and time series exchange rate models. We find that a random walk model performs as well as any estimated model at one to twelve month horizons for the dollar/pound, dollar/mark, dollar/yen and trade-weighted dollar
Text Chunking using Transformation-Based Learning
, 1995
"... Eric Brill introduced transformation-based learning and showed that it can do part-ofspeech tagging with fairly high accuracy. The same method can be applied at a higher level of textual interpretation for locating chunks in the tagged text, including non-recursive "baseNP" chunks. For ..."
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Cited by 523 (0 self)
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Eric Brill introduced transformation-based learning and showed that it can do part-ofspeech tagging with fairly high accuracy. The same method can be applied at a higher level of textual interpretation for locating chunks in the tagged text, including non-recursive "baseNP" chunks
MEGA5: Molecular evolutionary genetics analysis using maximum . . .
, 2011
"... Comparative analysis of molecular sequence data is essential for reconstructing the evolutionary histories of species and inferring the nature and extent of selective forces shaping the evolution of genes and species. Here, we announce the release of Molecular Evolutionary Genetics Analysis version ..."
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Cited by 7284 (25 self)
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favorably with other software packages in terms of computational efficiency and the accuracy of the estimates of phylogenetic trees, substitution parameters, and rate variation among sites. The MEGA user interface has now been enhanced to be activity driven to make it easier for the use of both beginners
The Capacity of Low-Density Parity-Check Codes Under Message-Passing Decoding
, 2001
"... In this paper, we present a general method for determining the capacity of low-density parity-check (LDPC) codes under message-passing decoding when used over any binary-input memoryless channel with discrete or continuous output alphabets. Transmitting at rates below this capacity, a randomly chos ..."
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Cited by 574 (9 self)
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In this paper, we present a general method for determining the capacity of low-density parity-check (LDPC) codes under message-passing decoding when used over any binary-input memoryless channel with discrete or continuous output alphabets. Transmitting at rates below this capacity, a randomly
Activity recognition from user-annotated acceleration data
, 2004
"... In this work, algorithms are developed and evaluated to detect physical activities from data acquired using five small biaxial accelerometers worn simultaneously on different parts of the body. Acceleration data was collected from 20 subjects without researcher supervision or observation. Subjects ..."
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Cited by 515 (7 self)
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performance recognizing everyday activities with an overall accuracy rate of 84%. The results show that although some activities are recognized well with subject-independent training data, others appear to require subject-specific training data. The results suggest that multiple accelerometers aid
Hidden Markov models in computational biology: applications to protein modeling
- JOURNAL OF MOLECULAR BIOLOGY
, 1994
"... Hidden.Markov Models (HMMs) are applied t.0 the problems of statistical modeling, database searching and multiple sequence alignment of protein families and protein domains. These methods are demonstrated the on globin family, the protein kinase catalytic domain, and the EF-hand calcium binding moti ..."
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Cited by 655 (39 self)
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database fit the globin, kinase and EF-hand HMMs), the '\ HMM is able to distinguish members of these families from non-members with a high degree of accuracy. Both the HMM and PROFILESEARCH (a technique used to search for relationships between a protein sequence and multiply aligned sequences
Neural Network-Based Face Detection
- IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE
, 1998
"... We present a neural network-based upright frontal face detection system. A retinally connected neural network examines small windows of an image and decides whether each window contains a face. The system arbitrates between multiple networks to improve performance over a single network. We present ..."
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Cited by 1206 (22 self)
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, which must be chosen to span the entire space of nonface images. Simple heuristics, such as using the fact that faces rarely overlap in images, can further improve the accuracy. Comparisons with several other state-of-the-art face detection systems are presented, showing that our system has comparable
Results 1 - 10
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17,268