Results 1 - 10 of 15,529

Table 10. Comparison of HuRef Heterozygous Indels to Indel Variants Identified from Other Studies

in The diploid genome sequence of an individual human
by Samuel Levy, Granger Sutton, Pauline C. Ng, Lars Feuk, Aaron L. Halpern, Brian P. Walenz, Nelson Axelrod, Jiaqi Huang, Ewen F. Kirkness, Gennady Denisov, Yuan Lin, Jeffrey R. Macdonald, Andy Wing, Chun Pang, Mary Shago, Timothy B. Stockwell, Alexia Tsiamouri, Vineet Bafna, Vikas Bansal, Saul A. Kravitz, Dana A. Busam, Karen Y. Beeson, Tina C. Mcintosh, Karin A. Remington, Josep F. Abril, John Gill, Jon Borman, Yu-hui Rogers, Marvin E. Frazier, Stephen W. Scherer, Robert L. Strausberg, J. Craig Venter
"... In PAGE 13: ... Based on this analysis, we found support for 37,893 homozygous deletions and 46,043 homozygous insertions that overlapped between the two datasets (Table 11). Comparison with the hetero- zygous deletions and insertions from the HuRef assembly yielded support for 9,431 deletions and 7,738 insertions, respectively ( Table10 ). These values represent a lower limit due to possible alignment issues in regions with tandem repeats.... ..."
Cited by 1

TABLE insert value delete

in unknown title
by unknown authors 2006
Cited by 3

Table 4. Distribution of bases in insertions and deletion events in non-coding regions.

in Phylogenetic profiling of insertions and deletions in vertebrate genomes, 2005. A Computational Algebra Approach to Systems Biology Brandilyn Stigler, Mathematical Biosciences Institute Synopsis: One goal of systems biology is to predict and modify the be
by Sagi Snir, Lior Pachter
"... In PAGE 13: ...34 bases. Table4 shows the base composition of indels in non-coding regions. We used the same method here for the inference of the content of the indel events as we did for coding regions, except for the fact that we considered indels of all length.... ..."
Cited by 1

TABLE IV CLASS RELATIVE EVENT ERRORS FOR EACH CLASS: T =TOTAL, I =INSERTIONS, D =DELETIONS.

in Activity recognition of assembly tasks using body-worn microphones and accelerometers
by Jamie A. Ward, Paul Lukowicz, Gerhard Tröster, Thad Starner 2006
Cited by 7

Table 4: Errors for insertions and deletions

in How to Summarize the Universe: Dynamic Maintenance of Quantiles
by Anna C. Gilbert, Yannis Kotidis, S. Muthukrishnan, Martin J. Strauss 2002
"... In PAGE 8: ... All algorithms were set up to use 11KB of memory for their data structures. Table4 summarizes the average error over all quan- tiles (for k = 1; : : : ; 15) and 4 repetitions of the experi- ment. For GK we simply ignore deletions.... ..."
Cited by 61

Table 4: Errors for insertions and deletions

in How to summarize the universe: Dynamic maintenance of quantiles
by Anna C. Gilbert, Yannis Kotidis, S. Muthukrishnan, Martin J. Strauss 2002
"... In PAGE 8: ... All algorithms were set up to use 11KB of memory for their data structures. Table4 summarizes the average error over all quan- tiles (for k = 1; : : : ; 15) and 4 repetitions of the experi- ment. For GK we simply ignore deletions.... ..."
Cited by 61

Table 1: Deletion and Insertion Data

in Analysis of Unknown Lexical Items using Morphological and
by Scott M. Thede, Mary Harper 1997
"... In PAGE 8: ... Figure 1 compares the deletion rates, Figure 2 shows the insertion rates, and Figure 3 shows the match rates. Table1 shows the total number of deletions and insertions, as well as eachasapercentage of the total number of parses for all the sentences in the corpus (1137). In Figure 1, we see that the deletion rate for the baseline data is zero, as expected.... In PAGE 8: ...here are 22 deletions out of 1137 total possible parse matches. This is an average of only 0.045 deletions per sentence, or 1.9% of the total parses, as shown in Figure 1 and Table1 . With 100% of the open-class dictionary missing|in other words, using only closed-class words|there are 225 deletions, an average of 0.... ..."
Cited by 1

Table 1: Deletion and Insertion Data

in Analysis of Unknown Lexical Items using Morphological and Syntactic Information with the TIMIT Corpus
by Scott M. Thede, Mary Harper 1997
Cited by 1

Table 2 illustrates our finding regarding events in both non-coding and coding regions. Information regarding coding regions is the left number at every column. Both insertions and deletions decay exponentially in length. An exception to this exponential decay in the length is events of 7 codons (21 bases) that stand out in both insertions and deletions (not shown in table). We do not have an explanation for this. It can also be seen that deletions are slightly longer on average than insertions.

in Phylogenetic profiling of insertions and deletions in vertebrate genomes, 2005. A Computational Algebra Approach to Systems Biology Brandilyn Stigler, Mathematical Biosciences Institute Synopsis: One goal of systems biology is to predict and modify the be
by Sagi Snir, Lior Pachter
"... In PAGE 11: ...826/4.34 Table2 . Length distribution of indel events in coding/non-coding regions.... In PAGE 13: ... Here the emphasis was to examine the deleted and inserted sequences and their properties. Values are shown in Table2 (right number of every column). There are 4465 events with total length of 19534 bases, which yields an average event length of 4.... ..."
Cited by 1

Table 1. Independent intron deletions

in unknown title
by unknown authors 2006
"... In PAGE 2: ... For human events, the length corresponds to the mouse intron. We classified the results into isolated events ( Table1 ), i.e.... In PAGE 6: ... Intron phases Introns can be classified as phase 0 (inserted between two codons), phase 1 (after the first base of a codon), or phase 2 (after the second base). We examined the phase distribution of the 116 deleted introns present in human from Table1 and compared it to the phase distribution of all introns from the RefSeq data set. The proportions for the deleted introns were 0.... In PAGE 7: ... The result also suggests that the phenom- enon of intron loss in vertebrates (at least within this gene) may be accelerated in the mammalian branch. Does intron loss disrupt AS? We identified two cases of intron losses disrupting known (Ref- Seq-confirmed) AS events that alter the predicted amino acid sequence of the gene (for details, see footnote to Table1 ). We also detected 20 losses that disrupt predicted (EST-based) events alter- natively processed in human.... ..."
Results 1 - 10 of 15,529