Results 1 - 10 of 87,868

genome sequence data for Staphylococcus aureus

by Mycobacterium Tuberculosis, Phelim Bradley, N. Claire Gordon, Timothy M. Walker, Laura Dunn, Simon Heys, Bill Huang, Sarah Earle, Louise J. Pankhurst, Luke Anson, Mariateresa De Cesare, Paolo Piazza, Antonina A. Votintseva, Tanya Golubchik, Daniel J. Wilson, David H. Wyllie, Stefan Niemann, Silke Feuerriegel, Thomas A. Kohl, Nazir Ismail, Shaheed V. Omar, E. Grace Smith, David Buck, Gil Mcvean, A. Sarah Walker, Tim E. A. Peto, Derrick W. Crook, Zamin Iqbal
"... antibiotic-resistance predictions from ..."
Abstract - Add to MetaCart
antibiotic-resistance predictions from

Use of whole genome sequence data to infer baculovirus phylogeny

by Elisabeth Herniou, David Richard O'reilly, Doreen Winstanley, Jennifer S. Cory, David R. O’reilly - J Virol , 2001
"... Several phylogenetic methods based on whole genome sequence data were evaluated using data from nine complete baculovirus genomes. The utility of three independent character sets was assessed. The first data set comprised the sequences of the 63 genes common to these viruses. The second set of chara ..."
Abstract - Cited by 66 (12 self) - Add to MetaCart
Several phylogenetic methods based on whole genome sequence data were evaluated using data from nine complete baculovirus genomes. The utility of three independent character sets was assessed. The first data set comprised the sequences of the 63 genes common to these viruses. The second set

Relationship Estimation from Whole-Genome Sequence Data

by Hong Li, Gustavo Glusman, Hao Hu, Juan Caballero, Robert Hubley, Jared C. Roach
"... The determination of the relationship between a pair of individuals is a fundamental application of genetics. Previously, we and others have demonstrated that identity-by-descent (IBD) information generated from high-density single-nucleotide polymorphism (SNP) data can greatly improve the power and ..."
Abstract - Cited by 2 (1 self) - Add to MetaCart
and accuracy of genetic relationship detection. Whole-genome sequencing (WGS) marks the final step in increasing genetic marker density by assaying all single-nucleotide variants (SNVs), and thus has the potential to further improve relationship detection by enabling more accurate detection of IBD segments

DNA Data Bank of Japan at work on genome sequence data

by Yoshio Tateno, Kaoru Fukami-kobayashi, Satoru Miyazaki, Hideaki Sugawara, Takashi Gojobori , 1998
"... We at the DNA Data Bank of Japan (DDBJ) (http://www.ddbj.nig.ac.jp ) have recently begun receiving, processing and releasing EST and genome sequence data submitted by various Japanese genome projects. The data include those for human, Arabidopsis thaliana, rice, nematode, Synechocystis sp. and Esch ..."
Abstract - Cited by 7 (2 self) - Add to MetaCart
We at the DNA Data Bank of Japan (DDBJ) (http://www.ddbj.nig.ac.jp ) have recently begun receiving, processing and releasing EST and genome sequence data submitted by various Japanese genome projects. The data include those for human, Arabidopsis thaliana, rice, nematode, Synechocystis sp

The Genome Sequence DataBase: towards an integrated functional genomics resource. Nucleic Acids Res., 27, 35–38 ten Berge,D. et al

by M. P. Skupski, M. Booker, A. Farmer, M. Harpold, W. Huang, J. Inman, D. Kiphart, C. Kodira, S. Root, F. Schilkey, J. Schwertfeger, A. Siepel, D. Stamper, N. Thayer, R. Thompson, J. Wortman, J. J. Zhuang, C. Harger - Dev. Biol , 1999
"... During 1998 the primary focus of the Genome Sequence DataBase (GSDB; ..."
Abstract - Cited by 1 (0 self) - Add to MetaCart
During 1998 the primary focus of the Genome Sequence DataBase (GSDB;

The Genome Sequence DataBase (GSDB): improving data quality and data access

by C. Harger, M. Skupski, J. Bingham, A. Farmer, S. Hoisie, P. Hraber, D. Kiphart, L. Krakowski, M. Mcleod, J. Schwertfeger, G. Seluja, A. Siepel, G. Singh, D. Stamper, P. Steadman, N. Thayer, R. Thompson, P. Wargo, M. Waugh, J. J. Zhuang, P. A. Schad - Nucleic Acids Res , 1998
"... In 1997 the primary focus of the Genome Sequence DataBase (GSDB; www.ncgr.org/gsdb) located at the National Center for Genome Resources was to improve data quality and accessibility. Efforts to increase the quality of data within the database included two major projects; one to identify and remove a ..."
Abstract - Cited by 5 (0 self) - Add to MetaCart
In 1997 the primary focus of the Genome Sequence DataBase (GSDB; www.ncgr.org/gsdb) located at the National Center for Genome Resources was to improve data quality and accessibility. Efforts to increase the quality of data within the database included two major projects; one to identify and remove

The impact of whole genome sequence data on drug discovery: A malaria case study

by Marcin P Joachimiak, Fred E Cohen, Marcin P. Joachimiak, Calvin Chang, Philip J. Rosenthal, Fred E. Cohen - Mol. Medicine , 2001
"... The impact of whole genome sequence data on drug discovery- A malaria case study ..."
Abstract - Cited by 1 (0 self) - Add to MetaCart
The impact of whole genome sequence data on drug discovery- A malaria case study

Tandem repeats finder: a program to analyze DNA sequences

by Gary Benson , 1999
"... A tandem repeat in DNA is two or more contiguous, approximate copies of a pattern of nucleotides. Tandem repeats have been shown to cause human disease, may play a variety of regulatory and evolutionary roles and are important laboratory and analytic tools. Extensive knowledge about pattern size, co ..."
Abstract - Cited by 961 (9 self) - Add to MetaCart
, copy number, mutational history, etc. for tandem repeats has been limited by the inability to easily detect them in genomic sequence data. In this paper, we present a new algorithm for finding tandem repeats which works without the need to specify either the pattern or pattern size. We model tandem

The sequence of the human genome

by J. Craig Venter, Et Al, J. Craig Venter, Mark D. Adams, Eugene W. Myers, Peter W. Li, Richard J. Mural, Granger G. Sutton, Hamilton O. Smith, Mark Y, Cheryl A. Evans, Robert A. Holt, Jeannine D. Gocayne, Peter Amanatides, Richard M. Ballew, Daniel H. Huson, Jennifer Russo Wortman, Qing Zhang, Xiangqun H. Zheng, Lin Chen, Marian Skupski, Gangadharan Subramanian, Paul D. Thomas, Jinghui Zhang, George L. Gabor Miklos, Catherine Nelson, Samuel Broder, Andrew G. C , 2001
"... The following resources related to this article are available online at ..."
Abstract - Cited by 740 (9 self) - Add to MetaCart
The following resources related to this article are available online at

The Genome Sequence DataBase (GSDB): meeting the challenge of genomic sequencing

by Gifford Keen, Jillian Burton, David Crowley, Emily Dickinson, Ada Espinosa-lujan, Carol Harger, Mo Manning, Shelley March, Mia Mcleod, Alicia Power, Maria Pumilia, Rhonda Reinert, David Rider, John Rohrlich, Jolene Schwertfeger Linda Smyth - Nucleic Acids Research , 1996
"... The genome sequence database (GSDB) is a complete, publicly available relational database of DNA sequences and annotation maintained by the National Center for Genome Resources (NCGR) under a Cooperative Agreement with the US Department of Energy (DOE). GSDB provides direct, client-server access to ..."
Abstract - Cited by 5 (0 self) - Add to MetaCart
The genome sequence database (GSDB) is a complete, publicly available relational database of DNA sequences and annotation maintained by the National Center for Genome Resources (NCGR) under a Cooperative Agreement with the US Department of Energy (DOE). GSDB provides direct, client-server access
Results 1 - 10 of 87,868