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Fitting a mixture model by expectation maximization to discover motifs in biopolymers.

by Timothy L Bailey , Charles Elkan - Proc Int Conf Intell Syst Mol Biol , 1994
"... Abstract The algorithm described in this paper discovers one or more motifs in a collection of DNA or protein sequences by using the technique of expect~tiou ma.,dmization to fit a two-component finite mixture model to the set of sequences. Multiple motifs are found by fitting a mixture model to th ..."
Abstract - Cited by 947 (5 self) - Add to MetaCart
Abstract The algorithm described in this paper discovers one or more motifs in a collection of DNA or protein sequences by using the technique of expect~tiou ma.,dmization to fit a two-component finite mixture model to the set of sequences. Multiple motifs are found by fitting a mixture model

Face Recognition Based on Fitting a 3D Morphable Model

by Volker Blanz, Thomas Vetter - IEEE TRANS. PATTERN ANAL. MACH. INTELL , 2003
"... This paper presents a method for face recognition across variations in pose, ranging from frontal to profile views, and across a wide range of illuminations, including cast shadows and specular reflections. To account for these variations, the algorithm simulates the process of image formation in 3D ..."
Abstract - Cited by 551 (19 self) - Add to MetaCart
This paper presents a method for face recognition across variations in pose, ranging from frontal to profile views, and across a wide range of illuminations, including cast shadows and specular reflections. To account for these variations, the algorithm simulates the process of image formation in 3

A theory of social comparison processes,”

by Leon Festinger - Human Relations, , 1954
"... In this paper we shall present a further development of a previously published theory concerning opinion influence processes in social groups (7). This further development has enabled us to extend the theory to deal with other areas, in addition to opinion formation, in which social comparison is i ..."
Abstract - Cited by 1318 (0 self) - Add to MetaCart
In this paper we shall present a further development of a previously published theory concerning opinion influence processes in social groups (7). This further development has enabled us to extend the theory to deal with other areas, in addition to opinion formation, in which social comparison

Reconstruction and Representation of 3D Objects with Radial Basis Functions

by J. C. Carr, R. K. Beatson, J. B. Cherrie, T. J. Mitchell, W. R. Fright, B. C. McCallum, T. R. Evans - Computer Graphics (SIGGRAPH ’01 Conf. Proc.), pages 67–76. ACM SIGGRAPH , 2001
"... We use polyharmonic Radial Basis Functions (RBFs) to reconstruct smooth, manifold surfaces from point-cloud data and to repair incomplete meshes. An object's surface is defined implicitly as the zero set of an RBF fitted to the given surface data. Fast methods for fitting and evaluating RBFs al ..."
Abstract - Cited by 505 (1 self) - Add to MetaCart
allow us to model large data sets, consisting of millions of surface points, by a single RBF---previously an impossible task. A greedy algorithm in the fitting process reduces the number of RBF centers required to represent a surface and results in significant compression and further computational

Pig Latin: A Not-So-Foreign Language for Data Processing

by Christopher Olston, Benjamin Reed, Utkarsh Srivastava, Ravi Kumar, Andrew Tomkins
"... There is a growing need for ad-hoc analysis of extremely large data sets, especially at internet companies where innovation critically depends on being able to analyze terabytes of data collected every day. Parallel database products, e.g., Teradata, offer a solution, but are usually prohibitively e ..."
Abstract - Cited by 607 (13 self) - Add to MetaCart
, is evidence of the above. However, the map-reduce paradigm is too low-level and rigid, and leads to a great deal of custom user code that is hard to maintain, and reuse. We describe a new language called Pig Latin that we have designed to fit in a sweet spot between the declarative style of SQL, and the low

Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr. sect

by T. A. Jones, J. -y. Zou, S. W. Cowan, M. Kjeldgaard - A , 1991
"... Map interpretation remains a critical step in solving the structure of a macromolecule. Errors introduced at this early stage may persist throughout crystallo-graphic refinement and result in an incorrect struc-ture. The normally quoted crystallographic residual is often a poor description for the q ..."
Abstract - Cited by 1051 (9 self) - Add to MetaCart
for the quality of the model. Strategies and tools are described that help to alleviate this problem. These simplify the model-building process, quantify the goodness of fit of the model on a per-residue basis and locate possible errors in pep-tide and side-chain conformations.

Quantal Response Equilibria For Normal Form Games

by Richard D. McKelvey, Thomas R. Palfrey - NORMAL FORM GAMES, GAMES AND ECONOMIC BEHAVIOR , 1995
"... We investigate the use of standard statistical models for quantal choice in a game theoretic setting. Players choose strategies based on relative expected utility, and assume other players do so as well. We define a Quantal Response Equilibrium (QRE) as a fixed point of this process, and establish e ..."
Abstract - Cited by 647 (28 self) - Add to MetaCart
We investigate the use of standard statistical models for quantal choice in a game theoretic setting. Players choose strategies based on relative expected utility, and assume other players do so as well. We define a Quantal Response Equilibrium (QRE) as a fixed point of this process, and establish

Probabilistic Latent Semantic Analysis

by Thomas Hofmann - In Proc. of Uncertainty in Artificial Intelligence, UAI’99 , 1999
"... Probabilistic Latent Semantic Analysis is a novel statistical technique for the analysis of two--mode and co-occurrence data, which has applications in information retrieval and filtering, natural language processing, machine learning from text, and in related areas. Compared to standard Latent Sema ..."
Abstract - Cited by 771 (9 self) - Add to MetaCart
Probabilistic Latent Semantic Analysis is a novel statistical technique for the analysis of two--mode and co-occurrence data, which has applications in information retrieval and filtering, natural language processing, machine learning from text, and in related areas. Compared to standard Latent

Splines: A Perfect Fit for Signal/Image Processing

by Michael Unser - IEEE SIGNAL PROCESSING MAGAZINE , 1999
"... ..."
Abstract - Cited by 380 (63 self) - Add to MetaCart
Abstract not found

K-SVD: An Algorithm for Designing Overcomplete Dictionaries for Sparse Representation

by Michal Aharon, et al. , 2006
"... In recent years there has been a growing interest in the study of sparse representation of signals. Using an overcomplete dictionary that contains prototype signal-atoms, signals are described by sparse linear combinations of these atoms. Applications that use sparse representation are many and inc ..."
Abstract - Cited by 935 (41 self) - Add to MetaCart
that alternates between sparse coding of the examples based on the current dictionary and a process of updating the dictionary atoms to better fit the data. The update of the dictionary columns is combined with an update of the sparse representations, thereby accelerating convergence. The K-SVD algorithm
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