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Highly Dynamic Destination-Sequenced Distance-Vector Routing (DSDV) for Mobile Computers
, 1994
"... An ad-hoc network is the cooperative engagement of a collection of Mobile Hosts without the required intervention of any centralized Access Point. In this paper we present an innovative design for the operation of such ad-hoc networks. The basic idea of the design is to operate each Mobile Host as a ..."
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Cited by 2022 (8 self)
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An ad-hoc network is the cooperative engagement of a collection of Mobile Hosts without the required intervention of any centralized Access Point. In this paper we present an innovative design for the operation of such ad-hoc networks. The basic idea of the design is to operate each Mobile Host as a specialized router, which periodically advertises its view of the interconnection topology with other Mobile Hosts within the network. This amounts to a new sort of routing protocol. We have investigated modifications to the basic Bellman-Ford routing mechanisms, as specified by RIP [5], to make it suitable for a dynamic and self-starting network mechanism as is required by users wishing to utilize adhoc networks. Our modifications address some of the previous objections to the use of Bellman-Ford, related to the poor looping properties of such algorithms in the face of broken links and the resulting time dependent nature of the interconnection topology describing the links between the Mobile Hosts. Finally, we describe the ways in which the basic network-layer routing can be modified to provide MAC-layer support for ad-hoc networks.
Sequence Logos: A New Way to Display Consensus Sequences
- Nucleic Acids Res
, 1990
"... INTRODUCTION A logo is "a single piece of type bearing two or more usually separate elements" [1]. In this paper, we use logos to display aligned sets of sequences. Sequence logos concentrate the following information into a single graphic [2]: 1. The general consensus of the sequences. ..."
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Cited by 638 (27 self)
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INTRODUCTION A logo is "a single piece of type bearing two or more usually separate elements" [1]. In this paper, we use logos to display aligned sets of sequences. Sequence logos concentrate the following information into a single graphic [2]: 1. The general consensus of the sequences
Efficient similarity search in sequence databases
, 1994
"... We propose an indexing method for time sequences for processing similarity queries. We use the Discrete Fourier Transform (DFT) to map time sequences to the frequency domain, the crucial observation being that, for most sequences of practical interest, only the first few frequencies are strong. Anot ..."
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Cited by 505 (21 self)
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We propose an indexing method for time sequences for processing similarity queries. We use the Discrete Fourier Transform (DFT) to map time sequences to the frequency domain, the crucial observation being that, for most sequences of practical interest, only the first few frequencies are strong
Multiple sequence alignment with the Clustal series of programs
- Nucleic Acids Res
, 2003
"... The Clustal series of programs are widely used in molecular biology for the multiple alignment of both nucleic acid and protein sequences and for preparing phylogenetic trees. The popularity of the programs depends on a number of factors, including not only the accuracy of the results, but also the ..."
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Cited by 725 (5 self)
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The Clustal series of programs are widely used in molecular biology for the multiple alignment of both nucleic acid and protein sequences and for preparing phylogenetic trees. The popularity of the programs depends on a number of factors, including not only the accuracy of the results, but also
A greedy algorithm for aligning DNA sequences
- J. COMPUT. BIOL
, 2000
"... For aligning DNA sequences that differ only by sequencing errors, or by equivalent errors from other sources, a greedy algorithm can be much faster than traditional dynamic programming approaches and yet produce an alignment that is guaranteed to be theoretically optimal. We introduce a new greedy a ..."
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Cited by 576 (16 self)
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For aligning DNA sequences that differ only by sequencing errors, or by equivalent errors from other sources, a greedy algorithm can be much faster than traditional dynamic programming approaches and yet produce an alignment that is guaranteed to be theoretically optimal. We introduce a new greedy
Simulating Physics with Computers
- SIAM Journal on Computing
, 1982
"... A digital computer is generally believed to be an efficient universal computing device; that is, it is believed able to simulate any physical computing device with an increase in computation time of at most a polynomial factor. This may not be true when quantum mechanics is taken into consideration. ..."
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Cited by 601 (1 self)
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A digital computer is generally believed to be an efficient universal computing device; that is, it is believed able to simulate any physical computing device with an increase in computation time of at most a polynomial factor. This may not be true when quantum mechanics is taken into consideration
Computational Lambda-Calculus and Monads
, 1988
"... The -calculus is considered an useful mathematical tool in the study of programming languages, since programs can be identified with -terms. However, if one goes further and uses fij-conversion to prove equivalence of programs, then a gross simplification 1 is introduced, that may jeopardise the ..."
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Cited by 505 (7 self)
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the applicability of theoretical results to real situations. In this paper we introduce a new calculus based on a categorical semantics for computations. This calculus provides a correct basis for proving equivalence of programs, independent from any specific computational model. 1 Introduction This paper
The Protection of Information in Computer Systems
, 1975
"... This tutorial paper explores the mechanics of protecting computer-stored information from unauthorized use or modification. It concentrates on those architectural structures--whether hardware or software--that are necessary to support information protection. The paper develops in three main sections ..."
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Cited by 815 (2 self)
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This tutorial paper explores the mechanics of protecting computer-stored information from unauthorized use or modification. It concentrates on those architectural structures--whether hardware or software--that are necessary to support information protection. The paper develops in three main
Human-Computer Interaction
, 1993
"... www.bcs-hci.org.uk Find out what happened at HCI2004 Interacting with … music aeroplanes petrol pumps Published by the British HCI Group • ISSN 1351-119X 1 ..."
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Cited by 582 (18 self)
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www.bcs-hci.org.uk Find out what happened at HCI2004 Interacting with … music aeroplanes petrol pumps Published by the British HCI Group • ISSN 1351-119X 1
Muscle: multiple sequence alignment with high accuracy and high throughput
- NUCLEIC ACIDS RES
, 2004
"... We describe MUSCLE, a new computer program for creating multiple alignments of protein sequences. Elements of the algorithm include fast distance estimation using kmer counting, progressive alignment using a new profile function we call the logexpectation score, and refinement using tree-dependent r ..."
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Cited by 2462 (7 self)
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We describe MUSCLE, a new computer program for creating multiple alignments of protein sequences. Elements of the algorithm include fast distance estimation using kmer counting, progressive alignment using a new profile function we call the logexpectation score, and refinement using tree
Results 1 - 10
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