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The nas parallel benchmarks

by D. H. Bailey, E. Barszcz, J. T. Barton, D. S. Browning, R. L. Carter, R. A. Fatoohi, P. O. Frederickson, T. A. Lasinski, H. D. Simon, V. Venkatakrishnan, S. K. Weeratunga - The International Journal of Supercomputer Applications , 1991
"... A new set of benchmarks has been developed for the performance evaluation of highly parallel supercomputers. These benchmarks consist of ve \parallel kernel " benchmarks and three \simulated application" benchmarks. Together they mimic the computation and data movement characterist ..."
Abstract - Cited by 694 (9 self) - Add to MetaCart
characteristics of large scale computational uid dynamics applications. The principal distinguishing feature of these benchmarks is their \pencil and paper " speci cation | all details of these benchmarks are speci ed only algorithmically. In this way many of the di culties associated with conventional

Local features and kernels for classification of texture and object categories: a comprehensive study

by J. Zhang, S. Lazebnik, C. Schmid - International Journal of Computer Vision , 2007
"... Recently, methods based on local image features have shown promise for texture and object recognition tasks. This paper presents a large-scale evaluation of an approach that represents images as distributions (signatures or histograms) of features extracted from a sparse set of keypoint locations an ..."
Abstract - Cited by 653 (34 self) - Add to MetaCart
Recently, methods based on local image features have shown promise for texture and object recognition tasks. This paper presents a large-scale evaluation of an approach that represents images as distributions (signatures or histograms) of features extracted from a sparse set of keypoint locations

Taming the Underlying Challenges of Reliable Multihop Routing in Sensor Networks

by Alec Woo, Terence Tong, David Culler - In SenSys , 2003
"... The dynamic and lossy nature of wireless communication poses major challenges to reliable, self-organizing multihop networks. These non-ideal characteristics are more problematic with the primitive, low-power radio transceivers found in sensor networks, and raise new issues that routing protocols mu ..."
Abstract - Cited by 781 (20 self) - Add to MetaCart
with constant space regardless of cell density. We study and evaluate link estimator, neighborhood table management, and reliable routing protocol techniques. We focus on a many-to-one, periodic data collection workload. We narrow the design space through evaluations on large-scale, high-level simulations to 50

A simple method for displaying the hydropathic character of a protein

by Jack Kyte, Russell, F. Doolittle - Journal of Molecular Biology , 1982
"... A computer program that progressively evaluates the hydrophilicity and hydrophobicity of a protein along its amino acid sequence has been devised. For this purpose, a hydropathy scale has been composed wherein the hydrophilic and hydrophobic properties of each of the 20 amino acid side-chains is tak ..."
Abstract - Cited by 2287 (2 self) - Add to MetaCart
A computer program that progressively evaluates the hydrophilicity and hydrophobicity of a protein along its amino acid sequence has been devised. For this purpose, a hydropathy scale has been composed wherein the hydrophilic and hydrophobic properties of each of the 20 amino acid side

OpenFlow: Enabling Innovation in Campus Networks

by Nick McKeown , Tom Anderson, Hari Balakrishnan, Guru Parulkar, Larry Peterson, Jennifer Rexford, Scott Shenker, Jonathan Turner , 2008
"... This whitepaper proposes OpenFlow: a way for researchers to run experimental protocols in the networks they use every day. OpenFlow is based on an Ethernet switch, with an internal flow-table, and a standardized interface to add and remove flow entries. Our goal is to encourage networking vendors ..."
Abstract - Cited by 718 (84 self) - Add to MetaCart
on the other hand, vendors do not need to expose the internal workings of their switches. In addition to allowing researchers to evaluate their ideas in real-world traffic settings, OpenFlow could serve as a useful campus component in proposed large-scale testbeds like GENI. Two buildings at Stanford

Fast and accurate short read alignment with Burrows-Wheeler transform

by Heng Li, Richard Durbin - BIOINFORMATICS, 2009, ADVANCE ACCESS , 2009
"... Motivation: The enormous amount of short reads generated by the new DNA sequencing technologies call for the development of fast and accurate read alignment programs. A first generation of hashtable based methods has been developed, including MAQ, which is accurate, feature rich and fast enough to a ..."
Abstract - Cited by 2096 (24 self) - Add to MetaCart
to align short reads from a single individual. However, MAQ does not support gapped alignment for single-end reads, which makes it unsuitable for alignment of longer reads where indels may occur frequently. The speed of MAQ is also a concern when the alignment is scaled up to the resequencing of hundreds

Active Messages: a Mechanism for Integrated Communication and Computation

by Thorsten Von Eicken, David E. Culler, Seth Copen Goldstein, Klaus Erik Schauser , 1992
"... The design challenge for large-scale multiprocessors is (1) to minimize communication overhead, (2) allow communication to overlap computation, and (3) coordinate the two without sacrificing processor cost/performance. We show that existing message passing multiprocessors have unnecessarily high com ..."
Abstract - Cited by 1054 (75 self) - Add to MetaCart
The design challenge for large-scale multiprocessors is (1) to minimize communication overhead, (2) allow communication to overlap computation, and (3) coordinate the two without sacrificing processor cost/performance. We show that existing message passing multiprocessors have unnecessarily high

Ad-hoc On-Demand Distance Vector Routing

by Charles E. Perkins, Elizabeth M. Royer - IN PROCEEDINGS OF THE 2ND IEEE WORKSHOP ON MOBILE COMPUTING SYSTEMS AND APPLICATIONS , 1997
"... An ad-hoc network is the cooperative engagement of a collection of mobile nodes without the required intervention of any centralized access point or existing infrastructure. In this paper we present Ad-hoc On Demand Distance Vector Routing (AODV), a novel algorithm for the operation of such ad-hoc n ..."
Abstract - Cited by 3240 (14 self) - Add to MetaCart
. Nevertheless we can still maintain most of the advantages of basic distance-vector routing mechanisms. We show that our algorithm scales to large populations of mobile nodes wishing to form ad-hoc networks. We also include an evaluation methodology and simulation results to verify the operation of our

Wide-Area Traffic: The Failure of Poisson Modeling

by Vern Paxson, Sally Floyd - IEEE/ACM TRANSACTIONS ON NETWORKING , 1995
"... Network arrivals are often modeled as Poisson processes for analytic simplicity, even though a number of traffic studies have shown that packet interarrivals are not exponentially distributed. We evaluate 24 wide-area traces, investigating a number of wide-area TCP arrival processes (session and con ..."
Abstract - Cited by 1775 (24 self) - Add to MetaCart
time scales; and that FTP data connection arrivals within FTP sessions come bunched into “connection bursts,” the largest of which are so large that they completely dominate FTP data traffic. Finally, we offer some results regarding how our findings relate to the possible self-similarity of widearea

M-tree: An Efficient Access Method for Similarity Search in Metric Spaces

by Paolo Ciaccia, Marco Patella, Pavel Zezula , 1997
"... A new access meth d, called M-tree, is proposed to organize and search large data sets from a generic "metric space", i.e. whE4 object proximity is only defined by a distance function satisfyingth positivity, symmetry, and triangle inequality postulates. We detail algorith[ for insertion o ..."
Abstract - Cited by 663 (38 self) - Add to MetaCart
A new access meth d, called M-tree, is proposed to organize and search large data sets from a generic "metric space", i.e. whE4 object proximity is only defined by a distance function satisfyingth positivity, symmetry, and triangle inequality postulates. We detail algorith[ for insertion
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