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Feature selection based on mutual information: Criteria of max-depe ndency, max-relevance, and min-redundancy

by Hanchuan Peng, Fuhui Long, Chris Ding - IEEE Trans. Pattern Analysis and Machine Intelligence
"... Abstract—Feature selection is an important problem for pattern classification systems. We study how to select good features according to the maximal statistical dependency criterion based on mutual information. Because of the difficulty in directly implementing the maximal dependency condition, we f ..."
Abstract - Cited by 533 (7 self) - Add to MetaCart
Abstract—Feature selection is an important problem for pattern classification systems. We study how to select good features according to the maximal statistical dependency criterion based on mutual information. Because of the difficulty in directly implementing the maximal dependency condition, we first derive an equivalent form, called minimal-redundancy-maximal-relevance criterion (mRMR), for first-order incremental feature selection. Then, we present a two-stage feature selection algorithm by combining mRMR and other more sophisticated feature selectors (e.g., wrappers). This allows us to select a compact set of superior features at very low cost. We perform extensive experimental comparison of our algorithm and other methods using three different classifiers (naive Bayes, support vector machine, and linear discriminate analysis) and four different data sets (handwritten digits, arrhythmia, NCI cancer cell lines, and lymphoma tissues). The results confirm that mRMR leads to promising improvement on feature selection and classification accuracy.

An Experimental Comparison of Min-Cut/Max-Flow Algorithms for Energy Minimization in Vision

by Yuri Boykov, Vladimir Kolmogorov - IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE , 2001
"... After [10, 15, 12, 2, 4] minimum cut/maximum flow algorithms on graphs emerged as an increasingly useful tool for exact or approximate energy minimization in low-level vision. The combinatorial optimization literature provides many min-cut/max-flow algorithms with different polynomial time compl ..."
Abstract - Cited by 1311 (54 self) - Add to MetaCart
After [10, 15, 12, 2, 4] minimum cut/maximum flow algorithms on graphs emerged as an increasingly useful tool for exact or approximate energy minimization in low-level vision. The combinatorial optimization literature provides many min-cut/max-flow algorithms with different polynomial time

MaxProp: Routing for Vehicle-Based Disruption-Tolerant Networks

by John Burgess, Brian Gallagher, David Jensen, Brian Neil Levine - In Proc. IEEE INFOCOM , 2006
"... Abstract — Disruption-tolerant networks (DTNs) attempt to route network messages via intermittently connected nodes. Routing in such environments is difficult because peers have little information about the state of the partitioned network and transfer opportunities between peers are of limited dura ..."
Abstract - Cited by 476 (12 self) - Add to MetaCart
duration. In this paper, we propose MaxProp, a protocol for effective routing of DTN messages. MaxProp is based on prioritizing both the schedule of packets transmitted to other peers and the schedule of packets to be dropped. These priorities are based on the path likelihoods to peers according

Limma: linear models for microarray data

by Gordon K. Smyth, Matthew Ritchie, Natalie Thorne, James Wettenhall, Wei Shi - Bioinformatics and Computational Biology Solutions using R and Bioconductor , 2005
"... This free open-source software implements academic research by the authors and co-workers. If you use it, please support the project by citing the appropriate journal articles listed in Section 2.1.Contents ..."
Abstract - Cited by 759 (13 self) - Add to MetaCart
This free open-source software implements academic research by the authors and co-workers. If you use it, please support the project by citing the appropriate journal articles listed in Section 2.1.Contents

Hierarchical Models of Object Recognition in Cortex

by Maximilian Riesenhuber, Tomaso Poggio , 1999
"... The classical model of visual processing in cortex is a hierarchy of increasingly sophisticated representations, extending in a natural way the model of simple to complex cells of Hubel and Wiesel. Somewhat surprisingly, little quantitative modeling has been done in the last 15 years to explore th ..."
Abstract - Cited by 817 (84 self) - Add to MetaCart
predictions. The model is based on a novel MAX-like operation on the inputs to certain cortical neurons which may have a general role in cortical function.

Graphical models, exponential families, and variational inference

by Martin J. Wainwright, Michael I. Jordan , 2008
"... The formalism of probabilistic graphical models provides a unifying framework for capturing complex dependencies among random variables, and building large-scale multivariate statistical models. Graphical models have become a focus of research in many statistical, computational and mathematical fiel ..."
Abstract - Cited by 800 (26 self) - Add to MetaCart
likelihoods, marginal probabilities and most probable configurations. We describe how a wide varietyof algorithms — among them sum-product, cluster variational methods, expectation-propagation, mean field methods, max-product and linear programming relaxation, as well as conic programming relaxations — can

Term-weighting approaches in automatic text retrieval

by Gerard Salton, Christopher Buckley - INFORMATION PROCESSING AND MANAGEMENT , 1988
"... The experimental evidence accumulated over the past 20 years indicates that text indexing systems based on the assignment of appropriately weighted single terms produce retrieval results that are superior to those obtainable with other more elaborate text representations. These results depend crucia ..."
Abstract - Cited by 2159 (10 self) - Add to MetaCart
The experimental evidence accumulated over the past 20 years indicates that text indexing systems based on the assignment of appropriately weighted single terms produce retrieval results that are superior to those obtainable with other more elaborate text representations. These results depend

Making the most of statistical analyses: Improving interpretation and presentation

by Gary King, Michael Tomz, Jason Wittenberg - American Journal of Political Science , 2000
"... Social scientists rarely take full advantage of the information available in their statistical results. As a consequence, they miss opportunities to present quantities that are of greatest substantive interest for their research and express the appropriate degree of certainty about these quantities. ..."
Abstract - Cited by 550 (24 self) - Add to MetaCart
Social scientists rarely take full advantage of the information available in their statistical results. As a consequence, they miss opportunities to present quantities that are of greatest substantive interest for their research and express the appropriate degree of certainty about these quantities

A greedy algorithm for aligning DNA sequences

by Zheng Zhang, Scott Schwartz, Lukas Wagner, Webb Miller - J. COMPUT. BIOL , 2000
"... For aligning DNA sequences that differ only by sequencing errors, or by equivalent errors from other sources, a greedy algorithm can be much faster than traditional dynamic programming approaches and yet produce an alignment that is guaranteed to be theoretically optimal. We introduce a new greedy a ..."
Abstract - Cited by 576 (16 self) - Add to MetaCart
alignment algorithm with particularly good performance and show that it computes the same alignment as does a certain dynamic programming algorithm, while executing over 10 times faster on appropriate data. An implementation of this algorithm is currently used in a program that assembles the Uni

Performance Pay and Productivity

by Edward P. Lazear - AMERICAN ECONOMIC REVIEW , 2000
"... Much of the theory in personnel economics relates to effects of monetary incentives on output, but the theory was untested because appropriate data were unavailable. A new data set for the Safelite Glass Corporation tests the predictions that average productivity will rise, the firm will attract a m ..."
Abstract - Cited by 498 (10 self) - Add to MetaCart
Much of the theory in personnel economics relates to effects of monetary incentives on output, but the theory was untested because appropriate data were unavailable. A new data set for the Safelite Glass Corporation tests the predictions that average productivity will rise, the firm will attract a
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