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Adaptive Fuzzy Segmentation of 3D MR Brain Images

by Hong Yan
"... Absrrod-A fuzzy c-means based adaptive clustering algorithm is proposed for the furzy segmentation of 3D M R brain images, which are typically corrupted by noise and intensity non-uniformity (INU) artifact. The proposed algorithm enforces the spatial continuity constraint to account for the spatial ..."
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Absrrod-A fuzzy c-means based adaptive clustering algorithm is proposed for the furzy segmentation of 3D M R brain images, which are typically corrupted by noise and intensity non-uniformity (INU) artifact. The proposed algorithm enforces the spatial continuity constraint to account for the spatial

A Multi-Scale Shape Description Tool for 3D MR Brain Images

by Julia A. Schnabel, Simon R. Arridge , 1996
"... We have developed a hierarchical multi-scale shape description tool which enables data-driven quantitative and qualitative shape studies of 3D MR brain images with respect to deformations occurring in patients with epilepsy. The grey-matter is examined in a slice-by-slice fashion, capturing global d ..."
Abstract - Cited by 1 (1 self) - Add to MetaCart
We have developed a hierarchical multi-scale shape description tool which enables data-driven quantitative and qualitative shape studies of 3D MR brain images with respect to deformations occurring in patients with epilepsy. The grey-matter is examined in a slice-by-slice fashion, capturing global

Determining correspondence in 3-d MR brain images using attribute vectors as morphological signatures of voxels

by Zhong Xue, Dinggang Shen, Christos Davatzikos - IEEE Transactions on Medical Imaging , 2004
"... Abstract—Finding point correspondence in anatomical images is a key step in shape analysis and deformable registration. This paper proposes an automatic correspondence detection algorithm for intramodality MR brain images of different subjects using wavelet-based attribute vectors (WAVs) defined on ..."
Abstract - Cited by 21 (9 self) - Add to MetaCart
Abstract—Finding point correspondence in anatomical images is a key step in shape analysis and deformable registration. This paper proposes an automatic correspondence detection algorithm for intramodality MR brain images of different subjects using wavelet-based attribute vectors (WAVs) defined

Sparse MRI: The Application of Compressed Sensing for Rapid MR Imaging

by Michael Lustig, David Donoho, John M. Pauly - MAGNETIC RESONANCE IN MEDICINE 58:1182–1195 , 2007
"... The sparsity which is implicit in MR images is exploited to significantly undersample k-space. Some MR images such as angiograms are already sparse in the pixel representation; other, more complicated images have a sparse representation in some transform domain–for example, in terms of spatial finit ..."
Abstract - Cited by 538 (11 self) - Add to MetaCart
demonstrate improved spatial resolution and accelerated acquisition for multislice fast spinecho brain imaging and 3D contrast enhanced angiography.

Segmentation of brain MR images through a hidden Markov random field model and the expectation-maximization algorithm

by Yongyue Zhang, Michael Brady, Stephen Smith - IEEE TRANSACTIONS ON MEDICAL. IMAGING , 2001
"... The finite mixture (FM) model is the most commonly used model for statistical segmentation of brain magnetic resonance (MR) images because of its simple mathematical form and the piecewise constant nature of ideal brain MR images. However, being a histogram-based model, the FM has an intrinsic limi ..."
Abstract - Cited by 639 (15 self) - Add to MetaCart
The finite mixture (FM) model is the most commonly used model for statistical segmentation of brain magnetic resonance (MR) images because of its simple mathematical form and the piecewise constant nature of ideal brain MR images. However, being a histogram-based model, the FM has an intrinsic

Nonrigid registration using free-form deformations: Application to breast MR images

by D. Rueckert, L. I. Sonoda, C. Hayes, D. L. G. Hill, M. O. Leach, D. J. Hawkes - IEEE Transactions on Medical Imaging , 1999
"... Abstract — In this paper we present a new approach for the nonrigid registration of contrast-enhanced breast MRI. A hierarchical transformation model of the motion of the breast has been developed. The global motion of the breast is modeled by an affine transformation while the local breast motion i ..."
Abstract - Cited by 697 (36 self) - Add to MetaCart
of the cost associated with the smoothness of the transformation and the cost associated with the image similarity. The algorithm has been applied to the fully automated registration of three-dimensional (3-D) breast MRI in volunteers and patients. In particular, we have compared the results of the proposed

Brain magnetic resonance imaging with contrast dependent on blood oxygenation.

by S Ogawa , T M Lee , A R Kay , D W Tank - Proc. Natl. Acad. Sci. USA , 1990
"... ABSTRACT Paramagnetic deoxyhemoglobin in venous blood is a naturally occurring contrast agent for magnetic resonance imaging (MRI). By accentuating the effects of this agent through the use of gradient-echo techniques in high fields, we demonstrate in vivo images of brain microvasculature with imag ..."
Abstract - Cited by 648 (1 self) - Add to MetaCart
ABSTRACT Paramagnetic deoxyhemoglobin in venous blood is a naturally occurring contrast agent for magnetic resonance imaging (MRI). By accentuating the effects of this agent through the use of gradient-echo techniques in high fields, we demonstrate in vivo images of brain microvasculature

Marching cubes: A high resolution 3D surface construction algorithm

by William E. Lorensen, Harvey E. Cline - COMPUTER GRAPHICS , 1987
"... We present a new algorithm, called marching cubes, that creates triangle models of constant density surfaces from 3D medical data. Using a divide-and-conquer approach to generate inter-slice connectivity, we create a case table that defines triangle topology. The algorithm processes the 3D medical d ..."
Abstract - Cited by 2696 (4 self) - Add to MetaCart
-slice connectivity, surface data, and gradient information present in the original 3D data. Results from computed tomography (CT), magnetic resonance (MR), and single-photon emission computed tomography (SPECT) illustrate the quality and functionality of marching cubes. We also discuss improvements that decrease

BrainWeb: Online Interface to a 3D MRI Simulated Brain Database

by Chris A. Cocosco, Vasken Kollokian, Remi K.-S. Kwan, G. Bruce Pike, Alan C. Evans - NeuroImage , 1997
"... Introduction: The increased importance of automated computer techniques for anatomical brain mapping from MR images and quantitative brain image analysis methods leads to an increased need for validation and evaluation of the effect of image acquisition parameters on performance of these procedures ..."
Abstract - Cited by 283 (3 self) - Add to MetaCart
, online on WWW, a set of realistic simulated brain MR image volumes (Simulated Brain Database, SBD) that allows the above issues to be examined in a controlled, systematic way. Methods: The 3D simulated MR images are generated by varying specific imaging parameters and artifacts in an MRI simulator

CLASSIC: consistent longitudinal alignment and segmentation for serial image computing

by Zhong Xue, Dinggang Shen, Christos Davatzikos - NeuroImage , 2006
"... Abstract. This paper proposes a temporally-consistent and spatiallyadaptive longitudinal MR brain image segmentation algorithm, referred to as CLASSIC, which aims at obtaining accurate measurements of rates of change of regional and global brain volumes from serial MR images. The algorithm incorpora ..."
Abstract - Cited by 38 (15 self) - Add to MetaCart
incorporates image-adaptive clustering, spatiotemporal smoothness constraints, and image warping to jointly segment a series of 3-D MR brain images of the same subject that might be undergoing changes due to development, aging or disease. Morphological changes, such as growth or atrophy, are also estimated
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