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Shallow Semantic Annotation of Biomedical Corpora for Information Extraction (2003)  (Make Corrections)  
Seth Kulick, Mark Liberman, Martha Palmer, Andrew Schein



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Abstract: Introduction Work over the last few years in literature data mining for biology has progressed from linguistically unsophisticated models to the adaptation of Natural Language Processing (NLP) techniques that use full parsers ([11, 16]) and coreference to extract relations that span multiple sentences ([12, 6]) (For an overview, see [7]). However, there has been a lack of annotated corpora that can fuel further work in this direction in the same way that the development of syntactically... (Update)

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BibTeX entry:   (Update)

@misc{ kulick-shallow,
  author = "Seth Kulick and Mark Liberman and Martha Palmer and Andrew Schein",
  title = "Shallow Semantic Annotation of Biomedical Corpora for Information Extraction",
  url = "citeseer.ist.psu.edu/kulick03shallow.html" }
Citations (may not include all citations):
475   Building a Large Annotated Corpus of English: the Penn Treeb.. - Marcus, Santorini et al. - 1993
55   Conditional random fields: Probabilistic models for segmenti.. - Lafferty, McCallum et al. - 2001
49   A maximum entropy model for part-of-speech tagging - Ratnaparkhi - 1996
34   Lexicalised Models for Statistical Parsing (context) - Collins - 1997
18   Nyu: Description of the mene named entity system as used in .. - Borthwick, Sterling et al. - 1998
13   Event extraction from biomedical papers using a full parser (context) - Yakushiji, Tateisi et al. - 2001
13   Robust relational parsing over biomedical literature: Extrac.. - Pustejovsky, Castano et al. - 2002
13   Bidirectional incremental parsing for automatic pathway iden.. - Park, Kim et al. - 2001
10   Using predicate-argument structures for information extracti.. - Surdeanu, Harabagiu et al. - 2003
6   The Necessity of Syntactic Parsing for Predicate Argument Re.. (context) - Gildea, Palmer - 2002
5   Creating knowledge repositories from biomedical reports: The.. - Hahn, Romacker et al. - 2002
3   Anaphora resolution in biomedical literature (context) - Castano, Zhang et al. - 2002
1   Accomplishments and challenges in litearture data mining for.. (context) - Hirschman, Park et al. - 2002
1   On coreferring: Coreference annotation in MUC and related sc.. (context) - van Deemter, Kibble - 2000
1   Entity detection and tracking - phase 1 - EDT and metonymy a.. (context) - Consortium - 2002

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