Michael de la Maza  Home/Search
Context Related
| mit.edu/aipublication...AITR1444.ps.Z Cached: PS.gz PS PDF This document uses CoBlitz to cache paper downloads. If your firewall is blocking outgoing connections to port 3125, you can use these links to download local copies.
Image Update HelpPS.gz PS PDF From: eras.org:1253/sb_dm/refs/refs (more) (Enter author homepages) |
Rate this article:      (best)Comment on this article |
Abstract: This thesis describes a system that synthesizes regularity exposing attributes from large protein databases. After processing primary and secondary structure data, this system discovers an amino acid representation that captures what are thought to be the three most important amino acid characteristics (size, charge, and hydrophobicity) for tertiary structure prediction. A neural network trained using this 16 bit representation achieves a performance accuracy on the secondary structure... (Update)
Context of citations to this paper: More
.... of Naval Medicine, 693] Kernforschungsanlage Karlsruhe, 779] Los Alamos National Laboratory, 394] Massachusets Institute of Technology, [1090] Naval Ocean Systems Center, 32] Ochanomizu University, 863] Ruhr Universit at Mannheim, 789] Sandia National Laboratories,...
.... Universite Paris VI, 364] Linkoping University, 68] Loughborough University of Technology, 828] Massachusets Institute of Technology, [694] Mitsubishi Electric Corp. 90] Mitsubishi Electric Research Laboratories, 88] NERAC inc. 489] National University of Singapore,...
Cited by: More
An Indexed Bibliography of Genetic Algorithms and Proteins - Alander (1996) (Correct)
An Indexed Bibliography of Genetic Algorithms and Databases.. - Alander (Correct)
An Indexed Bibliography of Genetic Algorithms Papers of 1993 - Jarmo T. Alander (1996) (Correct)
Active bibliography (related documents): More All
1.0: Automated Modeling and Nonlinear Axis Scaling - Leejay Wu (2005) (Correct)
0.7: Patterns, Structures, andAmino Acid Frequencies in.. - Fetrow, Palumbo, Berg (Correct)
0.5: A Distributed Parallel Genetic Algorithm for Solving.. - Beaumont, Bradshaw (1995) (Correct)
Similar documents based on text: More All
0.2: The Role of Chemical Mechanisms in Neural Computation and Learning - Hiller (Correct)
0.1: Presentation Based User Interfaces - Ciccarelli (1984) (Correct)
0.1: Offices Are Open Systems - Hewitt (1987) (Correct)
Related documents from co-citation: More All
6: Parallel Iterative Aligner with Genetic Algorithm (context) - Ishikawa, Toya et al. - 1993
5: On finding optimal potential customers from a large marketing database -- A gene.. (context) - Sandqvist - 1992
5: Self-replicating sequences of binary numbers - Banzhaf - 1993
BibTeX entry: (Update)
Michael de la Maza. Synthesizing regularity exposing attributes in large protein databases. Technical Report AI TR 1444, Massachusets Institute of Technology, 1993. * Achilles/MIT ga:Maza93c. http://citeseer.ist.psu.edu/delamaza93synthesizing.html More
@techreport{ maza93synthesizing,
author = "Michael de la Maza",
title = "Synthesizing Regularity Exposing Attributes in Large Protein Databases",
number = "AITR-1444",
pages = "90",
year = "1993",
url = "citeseer.ist.psu.edu/delamaza93synthesizing.html" }
Citations (may not include all citations):2177 Programs for Machine Learning (context) - Quinlan - 1993
2138 Genetic Algorithms in Search (context) - Goldberg - 1989
1931 Adaptation in Natural and Artificial Systems (context) - Holland - 1975
1527 Optimization by simulated annealing - Kirkpatrick, Gelatt et al. - 1983
1262 Classification and Regression Trees (context) - Breiman, Friedman et al. - 1984
548 Genetic Algorithms + Data Structures = Evolution Programs (context) - Michalewicz - 1992
537 A theory of the learnable (context) - Valiant - 1984
503 Instance-based learning algorithms (context) - Aha, Kibler et al. - 1991
349 Knowledge acquisition via incremental conceptual clustering (context) - Fisher - 1987
215 Learning decision lists - Rivest - 1987
203 What size net gives valid generalization (context) - Baum, Haussler - 1989
163 Learning efficient classification procedures and their appli.. (context) - Quinlan - 1983
153 Autoclass: A Bayesian classification system (context) - Cheeseman, Kelly et al. - 1988
151 A general lower bound on the number of examples needed for l.. (context) - Ehrenfeucht, Haussler et al. - 1988
134 Using recurrent networks for dimensionality reduction - Jones - 1992
102 Training a 3-node neural network is NP-complete - Blum, Rivest - 1992
70 Predicting the secondary structure of globular proteins usin.. (context) - Qian, Sejnowski - 1988
68 Hybrid system for protein secondary structure prediction (context) - Zhang, Mesirov et al. - 1992
64 Introduction to Protein Structure (context) - Branden, Tooze - 1991
48 Classifying learnable geometric concepts with the Vapnik-Che.. (context) - Blumer, Ehrenfeucht et al. - 1986
45 The Design and Analysis of Efficient Learning Algorithms (context) - Schapire - 1991
41 Genetic algorithms for the traveling salesman problem (context) - Grefenstette, Gopal et al. - 1985
38 A simulated annealing like convergence theory for the simple.. (context) - Thomas, Principe - 1991
33 Scheduling problems and traveling salesmen: The genetic edge.. (context) - Whitley, Starkweather et al. - 1989
30 Freeman and Company (context) - Stryer, Biochemistry - 1988
21 An empirical comparison of genetic and decisiontree classifi.. (context) - Quinlan - 1988
14 An analysis of selection procedures with particular attentio.. (context) - Maza, Tidor - 1993
14 Mapping and interpreting biological information (context) - Lander, Langridge et al. - 1991
13 Generalizing the PAC model for neural net and other learning.. (context) - Haussler - 1989
13 face-space (context) - Caldwell, Johnston et al. - 1991
12 Protein secondary structure prediction with a neural network (context) - Holley, Karplus - 1989
12 Prediction of protein conformation (context) - Chou, Fasman - 1974
12 uncertainty and the utility of categories (context) - Gluck, Corter - 1985
11 Improvements in protein secondary structure prediction by an.. (context) - Kneller, Cohen et al. - 1990
9 Extending the Valiant learning model (context) - Amsterdam - 1988
9 MIGRAINES neural network software (context) - Leighton - 1992
6 Predicting protein secondary structure with a nearest-neighb.. (context) - Salzberg, Cost - 1992
5 A polynomial time algorithm for generating neural networks f.. (context) - Roy, Mukhopadhyay - 1992
5 Algorithms for prediction of ff-helical and fi-structural re.. (context) - Lim - 1974
4 A user's guide to GENEsYs 1 (context) - Back, Hoffmeister - 1992
3 Descriptive discovery processes: Experiments in Baconian sci.. (context) - Langley - 1980
2 A user's guide to GAucsd 1 (context) - Schraudolph, Grefenstette - 1992
2 the use of sequence homologies to predict protein structure:.. (context) - Kabsch, Sander - 1984
2 Statistical analysis of the physical properties of the 20 na.. (context) - Kidera, Konishi et al. - 1985
2 Influence of the local amino acid sequence upon the zones of.. (context) - Gibrat, Robson et al. - 1991
1 Theoretical Drug Design Methods (context) - Franke - 1984
1 Artificial Intelligence Research Branch (context) - McKusick, Thompson et al. - 1990
1 AM: An artificial approach to discovery in mathematics as he.. (context) - Lenat - 1976
1 Analysis of sequence-similar pentapeptides in unrelated prot.. (context) - Argos - 1990
1 Biological Chemistry (context) - Mahler - 1971
1 Turing equivalence of neural network (context) - Sun, Chen et al. - 1991
1 The PAC model and Occam's Razor (context) - Kearns, Vazirani - 1992
1 Efficient use of erro (context) - Maron - 1993
1 Modern Drug Research (context) - Martin, Kutter et al. - 1989
1 Fast model selection using Hoeffding races (context) - Maron, Moore - 1993
Documents on the same site (http://genome.eras.org:1253/sb_dm/refs/refs.html): More
Two Algorithms for Inducing Causal Models from Data - Dawn Gregory (1994) (Correct)
Pattern Discovery Support Systems for Document Collections - Garett Dworman (1995) (Correct)
Bayesian Model Averaging for Linear Regression Models - Raftery, Madigan, Hoeting (1998) (Correct)
Online articles have much greater impact More about CiteSeer.IST Add search form to your site Submit documents Feedback
CiteSeer.IST - Copyright Penn State and NEC