| M. Vauchaussade de Chaumont, X.G. Viennot, Enumeration of RNA's secondary structures by complexity, in \Mathematics in Medecine and Biology ", V. Capasso, E. Grosso and S.L. Paven-Fontana eds., Lecture Notes in Biomath. 57 (1985) 360-365. |
....Context free grammars can describe a number of classical constraints, as, for example, the presence of particular motifs in sequences. They can also express long range interactions, as pairings in RNA. Secondary structures without pseudoknots can be encoded by words of a contextfree language [3,4] given by the grammar: M # aMbM cM e. The a s and b s code for the paired nucleotides, the c s for the unpaired ones. In order to get realistic random secondary structures, one can modify this simple grammar and add some statistical parameters by assigning weights to letters. As an ....
Vauchaussade de Chaumont, M. and Viennot, X.G 1985. Enumeration of RNA' s secondary structures by complexity. In Capasso, D., Grosso, E. and Paven-Fontana, S.L., editors, Mathematics in Medicine and Biology, Lecture Notes in Biomathematics vol. 57 pp. 360-365.
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M. Vauchaussade de Chaumont, X.G. Viennot, Enumeration of RNA's secondary structures by complexity, in \Mathematics in Medecine and Biology ", V. Capasso, E. Grosso and S.L. Paven-Fontana eds., Lecture Notes in Biomath. 57 (1985) 360-365.
No context found.
M. Vauchaussade de Chaumont and X.G. Viennot. Enumeration of RNA's secondary structures by complexity. In V. Capasso, E. Grosso, and S.L. Paven-Fontana, editors, Mathematics in medecine and Biology, volume 57 of Lecture Notes in Biomaths, pages 360365. Springer-Verlag, 1985.
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