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R. Curto, E. O. Voit, A. Sorribas, and M. Cascante. Mathematical models of purine metabolism in man. Mathematical Biosciences, 151:1--49, 1998.

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Simulating Large Biochemical and Biological Processes and.. - Antoniotti, al. (2002)   (Correct)

....and the references contained therein) We also remark that our proposed framework is relevant to the modeling of regulatory pathways; this is the subject of future work. To motivate our approach, we show how we applied our system to a sizable example: the purine metabolism pathway as described in [22, 7, 6]. 2. AN EXAMPLE: PURINE METABOLISM Let us revisit in detail the example of purine metabolism described in [22, 7, 6] The pathway for purine metabolism is presented in Figure 1. The main metabolite in purine biosynthesis is 5 phosphoribosyl 1 pyrophosphate (PRPP) A linear cascade of ....

....pathways; this is the subject of future work. To motivate our approach, we show how we applied our system to a sizable example: the purine metabolism pathway as described in [22, 7, 6] 2. AN EXAMPLE: PURINE METABOLISM Let us revisit in detail the example of purine metabolism described in [22, 7, 6]. The pathway for purine metabolism is presented in Figure 1. The main metabolite in purine biosynthesis is 5 phosphoribosyl 1 pyrophosphate (PRPP) A linear cascade of reactions converts PRPP into inosine monophosphate (IMP) IMP is the central branch point of the purine metabolism pathway. ....

R. Curto, E. O. Voit, A. Sorribas, and M. Cascante. Mathematical models of purine metabolism in man. Mathematical Biosciences, 151:1-49, 1998.


Taming the Complexity of Biochemical Models.. - Antoniotti..   (Correct)

.... the paper focuses on a detailed examination of one such example: namely, the repressilator system described by Elowitz and Leibler in [21] Later, in Section 7, we study two more complex and natural systems: the purine metabolism, first, described in [38] Chapter 10 and fully analyzed in [15, 16]; the quorum sensing process in Vibrio fischeri which has been studied in [26, 32, 37, 1] We conclude pointing out that the analysis presented in this paper is not limited to XS Systems, but could be extended to more general hybrid system models. 2 Related Works A survey on the di#erent ....

....one is the quorum sensing process in Vibrio fischeri, which allows us to discuss an extension of our framework admitting a system description based on more than one S system. 7. 1 Purine Metabolism We now revisit the example of purine metabolism described in [38] Chapter 10 and fully analyzed in [15, 16]. The pathway for purine metabolism is presented in Figure 4. A brief description of the key reactions follows, and the reader is invited to examine the more detailed summaries contained in the literature referenced in [38, 15, 16] The main metabolite in purine biosynthesis is PRPP ....

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R. Curto, E. O. Voit, A. Sorribas, and M. Cascante. Mathematical Models of Purine Metabolism in Man. Mathematical Biosciences, 151:1--49, 1998.


Foundations of a Query and Simulation System for.. - Antoniotti, Park, .. (2003)   (Correct)

....state; note that its implementation could be provided either as an analytical solution of the XS system or as a combination (macro) of TL predicates. 4. 1 An Example: Purine Metabolism Let us now revisit in detail the example of purine metabolism described in [3] Chapter 10 and fully analyzed in [20, 21]. The pathway for purine metabolism is presented in Figure 5. A brief description of the key reactions follows, and the reader is invited to examine the more detailed summaries contained in the literature referenced in [3, 20, 21] The main metabolite in purine biosynthesis is ....

....of purine metabolism described in [3] Chapter 10 and fully analyzed in [20, 21] The pathway for purine metabolism is presented in Figure 5. A brief description of the key reactions follows, and the reader is invited to examine the more detailed summaries contained in the literature referenced in [3, 20, 21]. The main metabolite in purine biosynthesis is 5 phosphoribosyl 1 pyrophosphate (PRPP) A linear cascade of reactions converts PRPP into inosine monophosphate (IMP) IMP is the central branch point of the purine metabolism pathway. IMP is transformed into AMP and GMP. Guanosine, adenosine and ....

R. Curto, E. O. Voit, A. Sorribas, and M. Cascante. Mathematical models of purine metabolism in man. Mathematical Biosciences, 151:1-49, 1998.


Modeling Cellular Behavior with Hybrid - Automata Bisimulation And   (Correct)

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R. Curto, E. O. Voit, A. Sorribas, and M. Cascante. Mathematical models of purine metabolism in man. Mathematical Biosciences, 151:1--49, 1998.


Foundations of a Query and Simulation System for.. - Antoniotti, Park, .. (2003)   (Correct)

No context found.

R. Curto, E. O. Voit, A. Sorribas, and M. Cascante. Mathematical models of purine metabolism in man. Mathematical Biosciences, 151:1-49, 1998. bA more complete version of this paper is available in our web site bioinormatics. cims. nyu. edu.

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