| Simons, K.T.; Ruczinski, I.; Kooperberg, C.; Fox, B.A.; Bystroff, C.; Baker, D. Improved recognition of native-like protein structures using a combination of sequence-dependent and sequence-independent features of proteins. Proteins 1999, 34, 82 -- 95. |
....[5 8] In this class of potentials, the interaction between a pair of residues are estimated from its relative frequency in database when compared with a reference state or a null model. This approach has been successfully applied in fold recognition, in threading, and in many other studies [7 14]. The drawback of this class of potential is that there are several conceptual di#culties. These include the neglect of chain connectivity in the reference state, and the problematic implicit assumption of Boltzmann distribution [15 17] An alternative approach is to find a set of parameters such ....
Simons KT, Ruczinski I, Kooperberg C, Fox B, Bystro# C, Baker D. Improved recognition of nativelike protein structures using a combination of sequence-dependent and sequence-independent features of proteins. Proteins 1999;34:82--95.
No context found.
Simons, K.T.; Ruczinski, I.; Kooperberg, C.; Fox, B.A.; Bystroff, C.; Baker, D. Improved recognition of native-like protein structures using a combination of sequence-dependent and sequence-independent features of proteins. Proteins 1999, 34, 82 -- 95.
No context found.
Simons, K.T., Ruczinski, I., Kooperberg, C., Fox, B.A., Bystro#, C., and Baker, D., Improved recognition of native-like protein structures using a combination of sequence-dependent and sequence-independent features of proteins, Proteins, 34:82--95, 1999.
No context found.
Simons KT, Ruczinski I, Kooperberg C, Fox BA, Bystroff C, Baker D: Improved recognition of native-like protein structures using a combination of sequence-dependent and sequence-independent features of proteins. Proteins 1999, 34:82-95.
No context found.
Simons KT, Ruczinski I, Kooperberg C, Fox BA, Bystroff C, Baker D. Improved recognition of native-like protein structures using a combination of sequence-dependent and sequence-independent features of proteins. Proteins 1999;34:82--95.
No context found.
Simons KT, Ruczinski I, Kooperberg C, Fox BA, Bystroff C, Baker D. Improved recognition of native-like protein structures using a combination of sequence-dependent and sequence-independent features of proteins. Proteins 1999;34:82--95.
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