K. Karplus, C. Barrett, M. Cline, M. Diekhans, L. Grate, and R. Hughey, "Predicting protein structure using only sequence information," Proteins -Struct. Funct. Genetics, pp. 121--125, Suppl. 3, 1999. Home/Search Document Details and Download
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....known structure in the family, the template structure was used to construct the sole initial model. If there were many possible template structures, models were constructed using all available templates. PSIBLAST alignments and other publicly available servers such as GenTHREADER [27] and SAM T99 [28], available as part of the CAFASP meta server [29] were also used to generate a variety of choices for alignments. These alternate alignments were used to construct initial models. Thus, for a given protein in a family with at least one known representative structure, there could be many template ....
Karplus K, Barrett C, Cline M, Diekhans M, Grate L, Hughey R: Predicting protein structure using only sequence information. Proteins: Struct Fund Genet 1999, S3:121-125
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Kevin Karplus, Christian Barrett, Melissa Cline, Mark Diekhans, Leslie Grate, and Richard Hughey. Predicting protein structure using only sequence information. Proteins: Structure, Function, and Genetics, to appear, 1999.
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.... for sequence analysis [4] 5] 6] 7] Our efforts include participation in the international Human Genome Project [8] development of the gene finding software chosen to annotate the human and Drosophila (fly) genomes [9] success in international protein structure prediction contests [10] [11], and creation of a SIMD programmable accelerator for sequenceanalysis [12] Since the introduction of our first bioinformatics course in 1996, we have trained many students with majors in Computer Science, Computer Engineering, Mathematics, Molecular, Cell and Developmental (MCD) Biology, ....
Kevin Karplus, Christian Barrett, Melissa Cline, Mark Diekhans, Leslie Grate, and Richard Hughey, "Predicting protein structure using only sequence information," Proteins: Structure, Function, and Genetics, vol. Supplement 3, no. 1, pp. 121--125, 1999.
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K. Karplus, C. Barrett, M. Cline, M. Diekhans, L. Grate, and R. Hughey, "Predicting protein structure using only sequence information," Proteins -Struct. Funct. Genetics, pp. 121--125, Suppl. 3, 1999.
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K. Karplus, C. Barrett, M. Cline, M. Diekhans, L. Grate, and R. Hughey. Predicting protein structure using only sequence information. Proteins: Structure, Function and Genetics, S3:121-125, 1999.
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Karplus, K., Barrett, C., Cline, M., Diekhans, M., Grate, L., and Hughey, R. (1999) Predicting protein structure using only sequence information, Proteins S3, 121--125.
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Karplus K, Barrett C, Cline M, Diekhans M, Grate L, Hughey R. Predicting protein structure using only sequence information. Proteins 1999;S3:121--125.
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