G. Navarro and M. Raffinot. Fast and simple character classes and bounded gaps pattern matching, with application to protein searching. In Proc. 5th Annual International ACM Conference on Computational Molecular Biology (RECOMB'01), pages 231--240, 2001. Home/Search Document Details and Download
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G. Navarro and M. Ra#not. Fast and simple character classes and bounded gaps pattern matching, with applications to protein searching. Journal of Computational Biology, 10(6):903-- 923, 2003.
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G. Navarro and M. Ra#not. Fast and simple character classes and bounded gaps pattern matching, with applications to protein searching. Journal of Computational Biology, 10(6):903--923, 2003.
Fast and Simple Character Classes and Bounded Gaps Pattern.. - Navarro, Raffinot (2003) (4 citations) Self-citation (Navarro Ranot) (Correct)
....the fastest in both cases. Moreover, in the second case, the search time improvements are dramatic, as our algorithms are about 100 times faster than the best RE matching algorithms when pattern preprocessing times become important. An extended abstract of this paper has already been published in [27], without all the details and without searching with di erences. We use the following de nitions throughout the paper. is the alphabet, a word on is a nite sequence of characters of . means the set of all the words build on . A word w 2 is a factor (or substring) of p 2 if ....
G. Navarro and M. Ranot. Fast and simple character classes and bounded gaps pattern matching, with application to protein searching. In Proceedings of the 5th Annual International Conference on Computational Molecular Biology (RECOMB), pages 231-240. ACM Press, 2001.
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G. Navarro and M. Raffinot. Fast and simple character classes and bounded gaps pattern matching, with application to protein searching. In Proc. 5th Annual International ACM Conference on Computational Molecular Biology (RECOMB'01), pages 231--240, 2001.
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Gonzalo Navarro and Mathieu Raffinot. Fast and simple character classes and bounded gaps pattern matching, with application to protein searching. In Proceedings of the Fifth Annual International Conference on Computational Biology, pages 231--240. ACM Press, 2001.
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G. Navarro and M. Ra#not. Fast and Simple Character Classes and Bounded Gaps Pattern Matching, with Application to Protein Searching. In Proc. 5th Annual International ACM Conference on Computational Molecular Biology (RECOMB'01), pages 231--240, 2001.
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G Navarro and M. Raffinot. Fast and Simple Character Classes and Bounded Gaps Pattern Matching, With Application to Protein Searching. In Annual Conference on Research in Computational Molecular Biology, Montreal, Canada, 2001.
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