| Adachi, J. and Hasegawa, M. (1996). MOLPHY version 2.3: programs for molecular phylogenetics based on maximum likelihood. Comput. Sci. |
.... the grouping (Rodents, Primates, Ferungulates) Using the complete mitochondrial genomes of these species we computed our new distance d(x; y) between each pair of species x and y and constructed a tree (Figure 1) using the neighbor joining (Saitou and Nei, 1987) program in the MOLPHY package (Adachi and Hasegawa, 1996). The tree is identical to the maximum likelihood tree of Cao, et al. Because neighbor joining is sometimes distrusted 3 (Hillis et al. 1994; Kuhner and Felsenstein, 1994) to further corroborate this grouping we applied our own hypercleaning program (Bryant et al. 2000) to the same distance ....
Adachi, J. and Hasegawa, M. (1996). MOLPHY version 2.3: programs for molecular phylogenetics based on maximum likelihood. Comput. Sci.
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