Enright, A.J., Iliopoulos, I., Kyrpides, N.C., and Ouzounis, C.A., Protein interaction maps for complete genomes based on gene fusion events, Nature, 402:86--90, 1999. Home/Search Document Not in Database Summary Related Articles Check |
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Protein-Protein Interaction Prediction for C. elegans - Thierry-Mieg (2000) (Correct)
....4. Protein Interaction Prediction It seems that bioinformatics has become interested in the question of predicting protein protein interactions fairly recently. To our knowledge, two groups have published work in this direction [12] Marcotte et al. 8] 9] and independently Enright et al. [5] have developed methods to predict protein protein interactions. They both rely on the hypothesis that when two proteins A and B are homologous to (a part of) a third protein in another organism, but are not homologous to each other, then they interact (the fused domain approach) So they are ....
A. Enright, I. Iliopoulos, N. Kyrpides, C. Ouzounis (1999) : Protein interaction maps for complete genomes based on gene fusion events. Nature 402, 86-90.
A Protein Interaction Extraction System - Limsoon Wong Kent (2001) (4 citations) (Correct)
....Medline abstracts based on natural language processing [13, 15] or co occurrences Supported in part by the Singapore National Science Technology Board. 1 of keywords [17] There are also several proposals for predicting protein interactions from sequence databases based on gene fusion events [11, 4]. These are specific techniques for making good guesses on individual protein interactions. These individual predictions still need to be assembled into pathways and visualized and managed using other means. We introduce here our Protein Interaction Extraction System (PIES) that aims to automate ....
....databases. The prototype will be released on our website towards the end of year 2000. We mention below several aspects that the PIES can be improved upon. The PIES currently relies on natural language analysis of biomedical literature for extracting interaction information. Recently methods [11, 4] based on detecting gene fusion events in sequence databases for predicting protein interactions have been proposed. These methods can be straightforwardly implemented using the Kleisli system. They are thus prime candidates for incorporation into the PIES to endow it with the ability to ....
A.J. Enright et. al. Protein interaction maps for complete genomes based on gene fusion events. Nature, 402:86--90, 1999.
Genome Informatics 15(2): 171--180 (2004) 171 PreSPI: .. - Interaction.. (Correct)
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Enright, A.J., Iliopoulos, I., Kyrpides, N.C., and Ouzounis, C.A., Protein interaction maps for complete genomes based on gene fusion events, Nature, 402:86--90, 1999.
The Use of Emerging Patterns in the Analysis of Gene.. - Dong, Li, Wong (2003) (Correct)
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A. J. Enright, I. Iliopoulos, N. C. Kyrpides, and C. A. Ouzounis. Protein interaction maps for complete genomes based on gene fusion events. Nature, 402:86--90, November 1999.
Predicting Protein-Protein Interactions from.. - Huang, Kanaan.. (2004) (Correct)
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Enright, A., Iliopoulos, I., Kyrpides, N. & Ouzounis, C. (1999) Protein interaction maps for complete genomes based on gene fusion events. Nature, 402, 86--90.
Genome Informatics 14: 250--259 (2003) A Domain.. - Probabilistic Framework.. (Correct)
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Enright, A.J., Iliopoulos, I., Kyrpides, N.C., and Ouzounis, C.A., Protein interaction maps for complete genomes based on gene fusion events, Nature, 402:86--90, 1999.
On Unsupervised Learning of Mixtures of Markov Sources - Seldin (Correct)
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A.J. Enright, I. Iliopoulos, N.C. Kyrpides, and C.A. Ouzounis. Protein interaction maps for complete genomes based on gene fusion events. Nature, 402(6757):86-90, 1999.
Extraction of Protein Domains and Signatures.. - Bejerano, Seldin.. (2001) (Correct)
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A. Enright, I. Iliopoulos, N. Kyrpides, and C. Ouzounis. Protein interaction maps for complete genomes based on gene fusion events. Nature, 402(6757):86--90, 1999.
Structural Genomics Analysis: Characteristics of.. - Hegyi, Lin.. (Correct)
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Enright AJ, Iliopoulos I, Kyrpides NC, Ouzounis CA. Protein interaction maps for complete genomes based on gene fusion events [see comments]. Nature 1999;402:86 --90.
A Scalable Algorithm for Clustering Protein Sequences - Guralnik, Karypis (Correct)
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A. J. Enright, I. Iliopoulos, N. Kyrpides, and C. A. Ouzounis. Protein interaction maps for complete genomes based on gene fusion events. Nature, 402:86{ 90, 1999.
Predicting Protein-Protein Interactions From Primary Structure - Bock, Gough (2001) (1 citation) (Correct)
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Enright,A.J., Ililopoulos,I., Kyrpides,N.C. and Ouzounis,C.A. (1999) Protein interaction maps for complete genomes based on gene fusion events. Nature, 402,86--90.
PIES, a Protein Interaction Extraction System - Wong (2001) (1 citation) (Correct)
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A.J. Enright et. al. Protein interaction maps for complete genomes based on gene fusion events. Nature, 402:86#90, 1999.
Application of Regulatory Sequence Analysis and.. - Van Helden.. (2000) (3 citations) (Correct)
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Enright, A. J., I. Iliopoulos, N. C. Kyrpides, and C. A. Ouzounis. 1999. Protein interaction maps for complete genomes based on gene fusion events [see comments]. Nature 402:86-90.
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