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Investigation of the three-dimensional lattice HP protein folding model using a (2004)  (Make Corrections)  
genetic algorithm Fbio L. Custdio, Hlio J.C. Barbosa and Laurent E. Dardenne...



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Abstract: An approach to the hydrophobic-polar (HP) protein folding model was developed using a genetic algorithm (GA) to find the optimal structures on a 3D cubic lattice. A modification was introduced to the scoring system of the original model to improve the model's capacity to generate more natural-like structures. The modification was based on the assumption that it may be preferable for a hydrophobic monomer to have a polar neighbor than to be in direct contact with the polar solvent. The... (Update)

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BibTeX entry:   (Update)

@misc{ fbio-investigation,
  author = "Genetic Algorithm Fbio",
  title = "Investigation of the three-dimensional lattice HP protein folding model
    using a",
  url = "citeseer.ist.psu.edu/758618.html" }
Citations (may not include all citations):
2138   Genetic Algorithms in Search (context) - DE - 1989
588   Handbook of Genetic Algorithms (context) - Davis - 1991
93   A genetic algorithm tutorial - Whitley - 1994
16   A test of lattice protein folding algorithms (context) - Yue - 1995
15   A standard ga approach to native protein conformation predic.. - Patton, Punch - 1995
12   Protein structure prediction with evolutionary algorithms - Krasnogor, Hart - 1999
8   Application of Evolutionary algorithms to protein folding pr.. - Piccolboni, Mauri - 1997
7   Protein folding: A perspective from theory and experiment (context) - CM, Karplus - 1998
2   A genetic algorithm for 3D protein folding simulations (context) - Unger, Moult - 1993
1   Complete and effective move set for simplified protein foldi.. - Lesh, Mitzenmacher - 2003
1   Protein folding in the 2D HP model (context) - RB, CNS - 2000
1   The algorithmics of folding proteins on lattices (context) - Chandru, Dattasharma - 2003
1   Algorithmic approach to quantifying the hydrophobic force co.. - Clote, Backofen et al. - 2000

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