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Modelling and Querying Interaction Networks in the Biochemical Abstract Machine BIOCHAM  (Make Corrections)  
Nathalie Chabrier-Rivier, François Fages, Sylvain Soliman



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Abstract: Machine BIOCHAM Nathalie Chabrier-Rivier & Francois Fages & Sylvain Soliman Projet Contraintes, INRIA Rocquencourt, BP105, 78153 Le Chesnay Cedex, France. (Update)

Active bibliography (related documents):   More   All
1.3:   Symbolic Model Checking of Biochemical Networks - Chabrier, Fages (2003)   (Correct)
1.0:   CMBSlib: a Library for Comparing Formalisms and Models of.. - Soliman, Fages (2004)   (Correct)
0.7:   Modeling and Querying Biomolecular Interaction Networks - Chabrier-Rivier.. (2003)   (Correct)

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0.4:   The Linear Logic Semantics of Concurrent Constraint Programs.. - Fages, Soliman   (Correct)
0.3:   CLPGUI: a Generic Graphical User Interface for Constraint .. - Fages, Soliman, Coolen (2004)   (Correct)
0.3:   Linear Concurrent Constraint Programming: Operational and.. - Fages, Ruet, Soliman (2000)   (Correct)

BibTeX entry:   (Update)

@misc{ chabrier-rivier-modelling,
  author = "Nathalie Chabrier-Rivier and François Fages and Sylvain Soliman",
  title = "Modelling and Querying Interaction Networks in the Biochemical Abstract
    Machine BIOCHAM",
  url = "citeseer.ist.psu.edu/701627.html" }
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149   New Generation Computing (context) - Muggleton, progol - 1995
42   Nusmv 2: An opensource tool for symbolic model checking - Cimatti, Clarke et al. - 2002
28   Representation and simulation of biochemical processes using.. (context) - Regev, Silverman et al. - 2001
24   Hybrid petri net representation of gene regulatory network (context) - Matsuno, Doi et al. - 2000
21   Pathway logic: Symbolic analysis of biological signaling (context) - Eker, Knapp et al. - 2002
20   Hybrid modeling and simulation of biomolecular networks - Alur, Belta et al. - 2034
18   Lateral inhibition through delta-notch signaling: A piecewis.. - Ghosh, Tomlin - 2034
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5   A medium for representation and exchange of biochemical netw.. (context) - Hucka, biology et al. - 2003
5   Diagrammatic notation and computational structure of gene ne.. (context) - Maimon, Browning - 2001
5   A new approach to decoding life: Systems biology (context) - Ideker, Galitski et al. - 2001
4   the virtual cell (context) - Schaff, Loew - 1999
3   Cellerator: extending a computer algebra system to include b.. (context) - Shapiro, Levchenko et al. - 2003
3   Kinetic analysis of a molecular model of the budding yeast c.. (context) - Chen, Csikasz-Nagy et al. - 2000
3   A core modeling language for the working molecular biologist - Chiaverini, Danos - 2003
2   Symbolic model cheking of biochemical networks (context) - Chabrier, Fages - 2003
2   BIOCHAM's user manual (context) - Chabrier, Fages et al. - 2003
2   and an application for molecular interaction (context) - Nagasaki, Onami et al. - 2000
2   Molecular interaction map of the mammalian cell cycle contro.. (context) - Kohn - 1999
1   Theoretical Computer Science (context) - Chabrier, Chiaverini et al. - 2004
1   The biochemical abstract machine BIOCHAM (context) - Chabrier-Rivier, Fages et al. - 2004
1   Process calculi and biology of molecular networks (context) - CPBIO - 2002
1   The role of raf kinases in malignant transformation (context) - Kolch, Kotwaliwale et al. - 2002
1   CMBSlib: a library for comparing formalisms and models of bi.. - Soliman, Fages - 2004
1   Scaffold proteins may biphasically affect the levels of mito.. (context) - Levchenko, Bruck et al. - 2000

Documents on the same site (http://pauillac.inria.fr/%7Efages/papers.html):   More
The Linear Logic Semantics of Concurrent Constraint Programs.. - Fages, Soliman   (Correct)
Typed Constraint Logic Programs: checking domain coercions.. - Coquery, Fages   (Correct)
Linear Concurrent Constraint Programming: Operational and.. - Fages, Ruet, Soliman (2000)   (Correct)

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