Microarray Data using Diffusion Kernels and Kernel CCA Jean-Philippe Vert...  Home/Search
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Abstract: We present an algorithm to extract features from high-dimensional gene expression profiles, based on the knowledge of a graph which links together genes known to participate to successive reactions in metabolic pathways. Motivated by the intuition that biologically relevant features are likely to exhibit smoothness with respect to the graph topology, the algorithm involves encoding the graph and the set of expression profiles into kernel functions, and performing a generalized form of... (Update)
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BibTeX entry: (Update)
@misc{ using-graphdriven,
author = "Microarray Data Using",
title = "Graph-Driven Features Extraction from",
url = "citeseer.ist.psu.edu/699358.html" }
Citations (may not include all citations):470 Spline Models for Observational Data (context) - Wahba - 1990
272 Cluster analysis and display of genome-wide expression patte.. (context) - Eisen, Spellman et al. - 1998
268 Making large-scale svm learning practical - Joachims - 1999
176 Regularization theory and neural networks architectures - Girosi, Jones et al. - 1995
93 American Mathematical Society (context) - Chung, theory et al. - 1997
86 Knowledge-based analysis of microarray gene expression data .. - Brown, Grundy et al. - 2000
51 Kernel independent component analysis - Bach, Jordan - 2002
39 Theory of reproducing Kernels and its applications (context) - Saitoh - 1988
37 MIPS: a database for genomes and protein sequences - Mewes, Frishman et al. - 2002
34 The KEGG databases at GenomeNet (context) - Kanehisa, Goto et al. - 2002
14 The stanford microarray database - Sherlock, Hernandez-Boussard et al. - 2001
14 Diffusion kernels on graphs and other discrete input - Kondor, Lafferty - 2002
13 Some applications of laplace eigenvalues of graphs - Mohar - 1997
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