MetaCartSign in to MyCiteSeer

Include Citations | Advanced Search | Help

Include Citations | Advanced Search | Help

  Efficient algorithms for approximate string matching with swaps (1997) [4 citations — 0 self]

Download:
Download as a PDF
by Dong Kyue Kim, Jee-soo Lee, Kunsoo Park, Yookun Cho
in LNCS 1264, Combinatorial Pattern Matching
http://theory.snu.ac.kr/./paper/dkkim_0497a.pdf
Add To MetaCart

Abstract:

Most research on the edit distance problem and the k-differences problem considered the set of edit operations consisting of changes, insertions, and deletions. In this paper we include the swap operation that interchanges two adjacent characters into the set of allowable edit operations, and we present an O(t min(m, n))-time algorithm for the extended edit distance problem, where t is the edit distance between the given strings, and an O(kn)-time algorithm for the extended k-differences problem. That is, we add swaps into the set of edit operations without increasing the time complexities of previous algorithms that consider only changes, insertions, and deletions for the edit distance and k-differences problems. 1999 Academic Press 1.

Citations

407 M.J.: The String-to-String Correction Problem – Wagner, Fischer - 1974
294 Time Warps, String Edits and Macromolecules: the Theory and Practice of Sequence Comparison – Kruskal - 1983
236 Fast text searching allowing errors – Wu, Manber - 1992
139 Algorithms for Approximate String Matching – Ukkonen - 1985
90 An O(ND) difference algorithm and its variations – Myers - 1986
89 Fast parallel and serial approximate string matching – LANDAU, VISHKIN - 1989
58 Transforming men into mice (polynomial algorithm for genomic distance problem – Hannenhalli, Pevzner - 1995
45 A Faster Algorithm for Approximate String Matching – Baeza-Yates, Navarro - 1996
33 On the complexity of the extended string-to-string correction problem – Wagner - 1975
31 Time-space-optimal string matching – Galil, Seiferas - 1983
18 Parallel dynamic programming – Galil, Park - 1991
14 Approximate string matching with suffix automata – Ukkonen, Wood - 1993
1 Data structures and algorithms for – Galil, Giancarlo - 1998