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Abstract: We present timings and performance numbers for a new short range three dimensional (3D) molecular dynamics (MD) code, SPaSM, on the Connection Machine-5 (CM-5). We demonstrate that runs with more than 10 8 particles are now possible on massively parallel MIMD computers. To the best of our knowledge this is at least an order of magnitude more particles than what has previously been reported. Typical production runs show sustained performance (including communication) in the range of 47-50... (Update)
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...in excess of several gigabytes. For example, molecular dynamics simulations of structural materials have reached 600 million atoms [1, 13]. While researchers don t usually perform simulations with 100 million atoms, 10 million to 40 million atom simulations are becoming routine....
...models with much greater detail than previously possible. Molecular dynamics simulations can consist of over 100 million atoms [8] and CFD simulations can contain over 23 million cells with numerous variables [9] While these applications allow for better simulation of...
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BibTeX entry: (Update)
P.Lomdahl et al.. 50 gflops molecular dynamics on the connection machine 5. Proceedings of Supercomputing 93 (IEEE Computer Society Press), 1993. http://citeseer.ist.psu.edu/127831.html More
@inproceedings{ lomdahl93gflops,
author = "Peter S. Lomdahl and Pablo Tamayo and Niels Gronbech-Jensen and David M. Beazley",
title = "50 {GFlops} molecular dynamics on the Connection Machine 5",
booktitle = "Supercomputing",
pages = "520-527",
year = "1993",
url = "citeseer.ist.psu.edu/127831.html" }
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